Trichinella spiralis: Tsp_08014
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Entry
Tsp_08014 CDS
T01609
Name
(RefSeq) putative coiled-coil domain-containing protein MTMR15
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Tsp_08014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_08014
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
Tsp_08014
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
Tsp_08014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
Cut8
CYAA_C
Motif
Other DBs
NCBI-GeneID:
10906571
NCBI-ProteinID:
XP_003373416
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MNRFECSDAEISKCSNFGEELLDFDSCENEEGFSNAGSYKRQLFEEIMAAVQSEEINSSI
LNENHFKIFQTYSTLSDWSKELYCLLFFRQTRWIAVSSLQRSYKEIATKDVVDEIISKKF
FIKLQSTDLTLEEMLSLLQSGSLIKIVKSLKQKPLSTKEQLIRQLIRFSLSQTTLIGNLK
DILKKKALAELGDCVKLSDDVQLAFLSAFHLFSPAEMSPNTATYPRSHVLTANLMYVSVC
ELENEMWNCWNSKKYTVCLHVGSRIRHLLDEELRLLSEKPCSVRLVHYQNFTTVVSLLRA
STVLAQAFEKLKMYDKANAEFEYLISINCQLVPAHRRSFWYERAILNYGRHLKMPKKAYE
LALDVIQDDTFDYYFRQRIYDRVLQMNLVDEDCEEQLSTNIQAALDETIEIDVEIPEKVI
SAPLLSKSMGLHSEGSIWLSLFGLLCWNEIYDSTVEDVWISRYQTYPLDLYAGEMFWINR
QKTFEKKFEALQCLSVQDIQSMLRASWREHEGINSIVKWDAFESSEMFESFLHTFACSGC
IFILCIQYLGYSSKALSTTTVNATLSCGRKRAHSEGEDIFDNHD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatttgaatgttcagatgcagaaatttcgaaatgttctaattttggtgaagaa
ttattggacttcgactcgtgtgaaaatgaagaaggattctcgaatgcgggatcttacaaa
cgacaattatttgaagaaataatggcagcggtccaatcagaagaaataaacagtagcata
ttgaatgagaatcactttaaaattttccaaacatactcaacattgtcagactggtccaaa
gaactttactgtcttttgttttttcgtcagacgcgttggattgcggtaagcagtttgcag
cgatcctacaaggaaattgcgaccaaagatgttgtagatgaaattatatcgaaaaaattc
ttcatcaagttgcaaagtactgatttgactttggaagaaatgttgtcacttcttcaaagc
ggttcactgattaaaattgtaaaatctttgaagcagaagccgctttctaccaaggagcag
ctgattcgtcagttgattcgtttttcattgtcgcaaactacattaattggaaatttgaaa
gatattttgaagaaaaaagcacttgcggaattgggagactgcgttaagctttctgatgat
gtgcaacttgcttttctttctgcttttcaccttttctctccagctgagatgtcgccaaac
actgcaacttatcctcgaagccatgttttaacagctaatcttatgtatgtttctgtttgt
gagctggaaaatgaaatgtggaattgttggaactcgaaaaagtatacggtttgtttgcat
gttggctctcgcatcagacatttacttgatgaagaattgcgacttttatcagaaaaacca
tgtagtgttcgactggttcattatcagaattttacaacagttgtttctcttcttcgagct
tctacagtgctggctcaagcatttgaaaaactgaaaatgtacgataaagcaaatgcagaa
tttgagtatctgatcagcataaactgtcagttggttcctgctcaccgtcgttcattttgg
tatgaacgagcaatattgaattatggacgtcatcttaagatgccgaaaaaagcgtatgaa
ctagctctggacgtgattcaagatgatacttttgattactatttccgtcagcgtatttat
gaccgtgttttgcaaatgaatctagtagatgaagactgtgaagagcagttatctactaat
attcaagcagctttggatgaaactattgagattgatgttgaaattccggaaaaagtcata
tctgcgccacttttatcaaaatcgatgggattgcattctgaaggttctatttggttgtca
ttatttggtttattatgctggaatgaaatatatgacagcactgttgaagatgtttggatt
tcaagatatcagacttatccgttagatttatatgctggcgaaatgttctggatcaaccga
cagaaaacttttgaaaaaaaatttgaagctttacaatgcttatctgtacaagacattcag
tcaatgcttcgtgcctcatggcgtgagcatgaagggataaacagcatagtgaaatgggat
gcttttgaatcatctgaaatgtttgagagtttcttgcatacgtttgcttgcagtggatgt
atttttattctgtgcattcaatatttaggttatagcagtaaagctctttctacgacaacg
gtaaatgctacactttcttgtggaagaaaaagagcacatagtgaaggagaagatattttt
gataaccatgactga
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