Trichinella spiralis: Tsp_08041
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Entry
Tsp_08041 CDS
T01609
Name
(RefSeq) tubulin alpha-1 chain
KO
K07374
tubulin alpha
Organism
tsp
Trichinella spiralis
Pathway
tsp04145
Phagosome
tsp04517
IgSF CAM signaling
tsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
Tsp_08041
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Tsp_08041
09142 Cell motility
04814 Motor proteins
Tsp_08041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_08041
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_08041
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsp04812
]
Tsp_08041
04147 Exosome [BR:
tsp04147
]
Tsp_08041
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Tsp_08041
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
Tsp_08041
Cytoskeleton proteins [BR:
tsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
Tsp_08041
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_08041
Exosomal proteins of other body fluids (saliva and urine)
Tsp_08041
Exosomal proteins of colorectal cancer cells
Tsp_08041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
10906598
NCBI-ProteinID:
XP_003373443
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MMAGLNFLFLQGNMAKDTDLIKAREVISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPT
DRSLGVADDSFTTFFSETGTGRHVPRAIFVDLEPSVIEIDITLFVTDEVRTGTYRQLFHP
EQLINGKEDAANNYARGHYTIGKEIIDLVLDRIRRLADNCTGLQGFLIFHSFGGGTGSGF
TSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
VTYAPVISAEKAYHEQLTVGEITNQCFDPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN
AAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWA
RLDHKFDLMYAKRAFVHWYVGEGMEEEAREDLAALEKDYEEVGVDTVDGDGKEADEY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaggattgaatttcctgtttttacagggaaacatggccaaggataccgattta
atcaaggcgcgcgaagtaatcagcattcacgtcggtcaagcaggagtgcagattggcaat
gcttgttgggagctgtactgcttggagcatggcattcaaccggacggtcaaatgcccaca
gacagaagtctcggagtcgcagacgactctttcaccacatttttcagtgaaactgggacc
ggccgtcatgtgccgcgtgctatctttgtcgatcttgagcccagtgtgattgaaattgac
ataactttgtttgttacagatgaagttcgcacgggaacgtacagacaactttttcatcca
gagcagttgattaacggaaaagaggatgcggccaacaactatgcccgtggtcactacacc
attggcaaggagattatcgacttggtgcttgatcgcatacgacgactggctgataattgc
acaggtttgcaaggctttttgattttccattcttttggtggtggtaccggcagtggattc
acatcactgctgatggaacgattgtcagtggattacggtaagaagagtaagctggaattt
gccatctatccagcgccgcaggtctctactgccgtggtcgaaccgtacaattcaatttta
accacccacaccaccctggaacactctgattgtgcttttatggttgacaacgaagctatt
tacgacatttgccgccgcaatttggacattgaacgtcctacgtacaccaatttgaatcgt
ttgattgggcaaatcgtgtcctccatcactgcttctctgcgttttgatggggctttaaac
gttgatttgaccgaatttcaaaccaacttagttccgtatcctcggattcattttcctcta
gtcacctatgccccagtaatctcggccgagaaagcctaccacgagcagttaacggttggt
gaaattacaaaccagtgctttgatccggccaatcaaatggttaaatgcgacccacgacat
ggaaaatacatggctgtctgtttgttgtatcgaggtgatgtggttccgaaagatgtcaat
gcagctattgcagccatcaagactaaaagaactattcagtttgttgactggtgtccgaca
ggtttcaaggttggaataaattatcaacctccgacagtggtccctggaggtgatttggct
aaagttccgcgtgcggtgtgtatgctttcgaatacaacggcaatagcagaagcttgggca
agacttgatcacaagttcgatttgatgtatgcaaaacgagcttttgttcactggtatgtt
ggagaaggaatggaagaagaagcccgtgaagatttggcagcgcttgaaaaagattatgaa
gaggttggcgttgatactgttgacggagatggtaaagaagccgatgagtactaa
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