Trichinella spiralis: Tsp_08111 Help Entry Tsp_08111         CDS       T01609                                  Name (RefSeq) hypothetical protein   KO K05544   tRNA-dihydrouridine synthase 3 [EC:1.3.1.89] Organism tsp  Trichinella spiralis Brite KEGG Orthology (KO) [BR:tsp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:tsp03016]     Tsp_08111 Enzymes [BR:tsp01000]  1. Oxidoreductases   1.3  Acting on the CH-CH group of donors    1.3.1  With NAD+ or NADP+ as acceptor     1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]      Tsp_08111 Transfer RNA biogenesis [BR:tsp03016]  Eukaryotic type   tRNA modification factors    Dihydorouridine synthases     Tsp_08111 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Dus RNase_T zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 Zn_finger_prot Motif Other DBs NCBI-GeneID:  10906672 NCBI-ProteinID:  XP_003373517 UniProt:  E5SLN3 LinkDB All DBs Position Unknown AA seq 747 aa AA seqDB search MDSSGVAPLKAEYIVAKKEKDGDNAQENFQEKRKGLNRKRQFYTVDDKKQLCPNILENIE CKFGENCRYAHDKAAHWDNKLPDISDNCPLFEELGFCKFGLNCRFAKGHTNLENLENIVK DSNGEMIKEWRFDEQNQISRKQKKEIRNLAHRLSSEYGNVRFESDFDKERCRKKIDWSGK LCLAPLTTLGNLPFRRLCVEFGAEVTCSEMVLSTSLFQGTVLKKSFSDKFTCKKVLNSIG LQSEWARLVRHESEKCFGIQICVNKPAQAWTVTKIIKKFAEFDFLDINAACPLDDICRAG GGANLLVRPKKLKEVVQSTKAALGDVPLTLKLRTDSNVVHQFLPDVYSWGVDRVVLHGRS RNQRYINKSDWHYIDQCASVSPVPLYGIGDVLSYEDYYQHLNCGKVQGVAVARGALIKPW IFTEIIQQRHWDIRSSERLEILKKFVKYGLLHWGSDSTGVNCTRRFLLEWLSFLCRYIPV GLLEYLPQKMNDRPPAYFGRDDLETLMASGKVSDWIKISEMLQLKKAEQFIVEGMLKMRN GVLNNFLNIALENLLVLDFEATCDQPIQIEPQEIIEFPCVNFSLKEDRIVSQFHSYVRPE VHPNLSSFCTNLTGIVQDMVNNQPTLTEVLTQFDGWLAEQQLLTDEQRDKWTMVTCGSWD LNYQLRNQCKWMGHPVPLYFKSWINIKKIACNATGNYPKSLIAMMQSLGVEHEGRLHSGI DDVKNIVRTVQELKRRKQPFYVTDSYR NT seq 2244 nt NT seq  +upstreamnt  +downstreamnt atggattccagtggtgttgctccactgaaagcagaatacatagttgctaagaaagagaaa gatggtgataacgctcaggaaaattttcaagaaaaaagaaaaggtctaaacagaaagcgt cagttttacactgtcgacgataagaagcagttgtgcccaaatattctcgaaaatattgaa tgcaagtttggtgaaaattgtcgttatgcgcatgataaagcagcccattgggacaataag ctcccagatatcagcgataattgtccattgtttgaagagcttggtttctgcaaatttggt ttgaattgtcgttttgctaaagggcatactaacttggagaacttggaaaatatcgtgaaa gattccaatggtgaaatgattaaagagtggagatttgatgagcaaaatcaaatttcaagg aaacagaaaaaagaaatacgtaatctggcacaccgcttatctagtgaatatggaaatgtg agatttgagagcgattttgataaagaaaggtgtaggaagaaaattgattggagtgggaag ttatgtttagctccgcttacaacccttggcaatttgccgtttcgccgtctgtgcgttgaa tttggtgccgaagtgacatgctccgaaatggttttgagcaccagcttatttcagggtaca gttttgaaaaaaagtttttctgataaatttacatgtaaaaaagtgttgaattcaataggt ctccagagtgaatgggctcgtttggtacgtcacgaaagtgaaaagtgttttggcatacaa atatgtgtgaacaaacctgcacaagcgtggacagtcaccaaaataatcaaaaaatttgca gagtttgattttctggatattaacgctgcatgtccattggatgatatttgccgtgcaggc ggtggtgccaatttgcttgttcgtccaaaaaaattgaaggaagttgttcaaagtaccaaa gcagcacttggcgatgttccgcttacactaaaattacgtacagacagcaatgtggtgcat cagtttttgccggacgtctattcgtggggagtggatagagttgttttgcacggccgatca cgcaatcagcgttacattaacaagtctgattggcattatattgaccagtgcgccagtgta tcgccggtacctttatatggaatcggtgatgtgttgagctatgaagattattatcagcat ttgaattgtggcaaggtgcaaggtgttgctgttgctcgcggagcactgataaagccatgg atatttacagaaattattcaacaacgacactgggacattcgatcaagtgaacgattggaa attttgaaaaagtttgtgaaatacggtttgctgcactggggatcggacagtactggtgtg aactgtactcgccgatttttgctggaatggttgtcgtttctttgtcgttacattccagtt ggcttgcttgaatatttaccacagaagatgaatgaccgaccacctgcatattttggccgt gatgatttggaaacgttgatggccagcggaaaagtgtcggattggattaaaatatctgaa atgttgcagttgaagaaagcagaacaatttattgttgaaggcatgttgaaaatgaggaac ggtgttttgaacaattttttaaatattgcgctggaaaatttgttagttttagattttgaa gcaacctgcgatcaaccgatacaaattgagccgcaagagataattgaatttccttgcgtc aatttcagtctgaaagaggacagaatcgtttctcagttccactcgtacgtccgtccagag gtgcatccaaatttgagctcattctgcaccaatctgaccggcattgtccaagacatggtc aacaatcagccgacactgaccgaagttttgacacagtttgacggttggttagctgaacaa cagctgctgaccgacgaacaacgcgacaagtggacaatggtcacctgcggcagttgggat ttgaattaccaactccgcaatcagtgtaaatggatgggacatccggtaccgttgtatttc aaaagttggatcaatataaagaagatcgcttgcaatgctactggcaattatccgaaaagt ttgatcgccatgatgcaatctttgggcgttgaacacgaaggccgactccacagcggtata gatgacgtgaaaaatattgttcgcactgtacaagagttgaagcgtcgcaagcaaccgttc tacgtcaccgacagctaccgttga

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