Trichinella spiralis: Tsp_08207
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Entry
Tsp_08207 CDS
T01609
Name
(RefSeq) nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
10906771
NCBI-ProteinID:
XP_003373616
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MYPNNVSSQTPQPAPVSSPPLMRGIGKMALGGDSIVIRGQPKGGPPPERLINLSNVISPK
LARRQADSTATDSQDEPYAWEAREALRKLVVGHELLFTVDYKVPTSGREYGSVFVTIDGK
RQNVAETLVSQGWLEVRQSGVKSNDDAVKRLLELQNTAKANSKGKWQADDATKHVRQIIW
STANPRSLVESFNRSRIKAVIEHVRDGCTVRAFLLPSFHYVTIMISGIRTPTFKLGEGGM
IQDPEPFAEEAKFFTECRLLQNDVEVILEGASNQNFLGTVLHKHGNIAEALLKEGFAKCV
DWSMPLVTSGPEKLREAERQAKERRLRLWKNYEPSHAKAAGENSFQAKVVEITLGDSMII
KKQDGMYQKIFLSSVRPPRLEDAGLVRETQSGRQFRPLYDIPFMFAAREVLRKKLIGKKV
NVTIDYVQPSVNQLPERTCCTVVFGGQNMAELLVSKGLATVVRNRQGDENRSPFYDNLLT
AEAAAEKARLGIHSLKHSVDANHMETANIYNTSEKQIVRLQELQGNVAKSKQFLPFLIRS
GRTDGLVEFVVTGSRLRIFVPKESIMITLLLGGVSCPRPGRMTKGGGAAEAEDEPFSQEA
LQFTKDFCLQREVEFEVESVDKAGNFIGWCFFHGKNLSELLVENGLAAVHFTADRSKYGP
ALRAAEMRAKEAKLKIWTLAYYDDEAEELNDADDLEKGPSATPSAGIVPERVPQYKAVLV
TEICENLKFYIQYFDQGSQLEQMMKEMRTALNADPGRQGAFVPKKGDVCAALFSADQQWY
RARVEAVRKDEIDVFYIDFGNREARKQNELASLPAGFASRPPGARECAFALLKLPDDADY
CTAAVKHFYKEVNGEQCLMNMEYRLGGVEYVTLLRADQSDIGKSLIRNGYCLVEQRRDRK
MQLQLADYLQAQESAKSERVCK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaaataacgttagcagtcaaaccccgcagcctgcacctgtctcttccccacct
ttgatgcgtggtattggaaaaatggctctgggcggtgattccattgtgatacgtggccaa
ccgaaaggcgggccgcctcccgaacgtcttatcaacctgagcaatgttatttccccaaag
ttggctcggcgtcaggccgattcgactgctactgattcccaagatgaaccctacgcttgg
gaagccagagaagcacttcgaaagctggtcgttggccatgagttgttgttcaccgtagat
tataaagtgccgacaagcggcagagaatatggaagcgttttcgttactatagacggtaaa
cgtcagaatgtcgccgagacactagtaagccaaggttggctggaagtgcgtcagagtggc
gtgaaaagcaacgatgatgcagtgaagcgtctgttggaattgcagaacacggcgaaggcg
aattcaaaaggcaaatggcaagcagatgatgcgacaaagcatgtccgccaaatcatctgg
tcaacagcaaaccccagaagcttggtcgaatctttcaaccgcagtcgcatcaaagcggtc
atcgagcatgtccgggacggctgcaccgtcagagcttttctactaccctcttttcattac
gtgaccatcatgatttctggcattcgaactccaacattcaaacttggtgaaggtggaatg
atacaagatccagaaccatttgcggaagaagcgaaattttttacagaatgtcgtctgctt
cagaatgatgtggaagttatattggaaggcgcgtcgaatcagaattttttgggcactgtg
ttgcataagcatggaaatattgccgaagcgttgttgaaagaaggcttcgccaagtgtgta
gactggagcatgcctttggtaacctctgggccggagaagttgcgtgaagctgaacgtcaa
gcgaaagagcgtcgccttcgattgtggaaaaattacgaaccgagtcacgcgaaagccgca
ggtgaaaacagttttcaggcgaaggttgtggaaattacccttggcgattcgatgataatc
aaaaagcaggacgggatgtaccagaaaatattcctgtcatcagtcagaccaccacggttg
gaagatgctggcttagtgagagaaactcagtcgggtcgacaattcagacctttgtacgac
attccatttatgtttgcagctcgagaagtgttgcgcaaaaaattgattggcaaaaaggtg
aacgtgacgatcgattacgttcagccgagcgtcaatcagttgccggagaggacttgttgc
acggtggtcttcggcggacaaaatatggccgaactgttggttagcaaaggtttggctaca
gttgtacggaatagacaaggggacgaaaatcgatcacctttctacgacaatcttctaact
gctgaagcagctgctgaaaaggctcgtcttggcattcactcactcaagcattcggtcgac
gccaaccacatggaaaccgccaacatttacaatacaagcgaaaagcaaattgtacgactt
caagaactacaagggaatgttgcgaagagtaagcaatttttgccgtttttgattcgatca
ggacgcaccgacggtttggtagagtttgttgtgacgggcagtcgtttgcgcatttttgta
cccaaagagtccattatgataactcttcttctcggaggtgtcagttgtccaagacctgga
agaatgaccaaaggcggtggtgcagcagaagctgaagacgaaccgtttagccaagaagcg
ctgcagtttacgaaagatttttgcttacaacgagaagttgaattcgaagttgaatccgtc
gacaaagccggcaatttcatcggctggtgtttttttcatggcaaaaatttgtccgagctg
cttgtggagaacggcctcgctgcggttcacttcaccgccgacaggtcgaaatacggtcca
gcattgagagccgccgaaatgcgtgccaaagaagcgaagttgaaaatttggaccctagct
tattacgacgatgaggccgaagaattgaacgatgcggacgatttggaaaaaggcccctcg
gccaccccttcggccggtatcgttccggagcgagtgccgcagtacaaagccgttctggtg
acggagatatgtgaaaatttgaaattttacattcaatatttcgatcaaggttcgcagttg
gagcagatgatgaaggagatgcggactgcactgaatgccgatcctggcaggcaaggggca
tttgttcccaaaaagggcgatgtttgtgctgcgttgttcagcgcagatcagcagtggtat
cgagctcgagtcgaagctgtccgaaaagacgaaattgacgtgttttatattgattttgga
aacagagaagccagaaagcaaaatgagctggccagtttgccagcaggattcgcttcacgt
cctcctggagcaagggaatgcgcgtttgctttgctcaagcttccggatgatgccgattat
tgcacagctgcggtgaagcacttttataaggaggtgaacggggaacagtgtttgatgaat
atggaatatcgtcttggtggtgtggaatatgtcactttgcttcgagccgatcaaagtgac
attggaaaatcgttgattcgaaacggctattgtctggtggaacaacgtcgtgatcggaaa
atgcagctgcaacttgctgactatttacaagctcaggaatctgcgaaatcggaaagggta
tgcaaataa
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