Trichinella spiralis: Tsp_08235
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Entry
Tsp_08235 CDS
T01609
Name
(RefSeq) outer membrane protein, OMP85 family
KO
K07277
outer membrane protein insertion porin family
Organism
tsp
Trichinella spiralis
Pathway
tsp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Tsp_08235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_08235
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsp02000
]
Tsp_08235
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Tsp_08235
Transporters [BR:
tsp02000
]
Other transporters
Pores ion channels [TC:
1
]
Tsp_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
ShlB
Motif
Other DBs
NCBI-GeneID:
10906799
NCBI-ProteinID:
XP_003373644
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MKDEIKRRMVFTGKEPNAEKILKEKIILEQVIFDGVWKTKHSALVSLCSHLFSASNLKDL
ANRAVTLKKYMEDISMFEDISIHVTASNKTFNGVNLHAGAGINSINETNSYMQLACRNAF
GSGELLKTSISVCQELKAMFDFDFAKPFLSVLNSGMRFNVYRKVRPLSQCNGISSDVGAS
IELRHRLWKNWIYSLCLINCWRHFKTSSDVFLIREHAGHSVKNSVENSLIYCTLNNMLMP
TSGSFFKLSQELAGGAGDVNFIRHSLDLKANFQLPFNLINANSFSFNHVIANSPRTLLCM
DRIFLGGSQNLRGFVPNCIGCQTNGNCLGGSSSICFVTHLYRRIFGDFLYAHAFAAVGSL
WYAPVNLELSKLVKELSAGRRRSSVGMGLLFKIGSFCRIEINYCFPLEYQIEDRIHRGLQ
VGAGVSFL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaaataaagcgcagaatggtattcacaggaaaagagccaaatgcggagaaa
attctcaaagaaaaaattatattggaacaagtcatttttgacggtgtttggaagacgaag
cacagtgcccttgtgtcattgtgttcgcatcttttttccgcatccaatttgaaagacctc
gcaaatcgagctgtaacacttaaaaaatatatggaagatatatctatgtttgaagacatt
tctatacatgttactgctagcaataagacattcaacggtgtaaaccttcacgcaggtgct
ggaattaatagtataaatgaaactaatagctatatgcagctggcatgcaggaatgcattt
ggcagcggagaattgttgaaaacttccatatctgtttgtcaagaattgaaggcgatgttc
gattttgactttgccaagccatttttgtcagttttgaacagcggtatgcggtttaatgtt
taccgcaaagtgagacctctgtctcagtgtaatggaatttcgagcgacgttggcgccagt
attgaactgagacatcgtctgtggaagaactggatttatagtttatgtctgattaattgt
tggcgtcatttcaaaacttcgtcggatgtgtttctaattagagaacatgccggacacagt
gtgaagaatagcgttgaaaattctctgatctattgcacgttaaataatatgctaatgccg
acgtcaggcagctttttcaagctgagtcaagaattggccggcggtgcgggggatgtgaat
ttcattcgtcacagtttagatttgaaggctaattttcaactgccattcaatttgatcaac
gcaaacagtttttcattcaatcacgttatagccaattctccaagaacgttgctttgcatg
gataggatatttcttggcggttcgcagaatttgaggggattcgtaccaaattgtattgga
tgtcaaaccaacggcaactgtttaggagggtctagtagtatatgctttgttacgcatctt
tatcgacgaattttcggcgactttctatacgcgcatgctttcgctgcggttggcagcctc
tggtatgctcctgttaatttggaattgtcgaaacttgtcaaagaattgagcgccggacgg
cgtcgcagcagtgtcggcatgggtctgttgttcaaaattggcagcttttgtcgaattgaa
atcaactattgtttccctttggaatatcaaattgaagacagaatacatcgtggattgcaa
gttggtgctggtgtatcgtttctgtaa
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