Trichinella spiralis: Tsp_08245
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Entry
Tsp_08245 CDS
T01609
Name
(RefSeq) peptidyl-alpha-hydroxyglycine alpha-amidating lyase 2
KO
K18200
peptidylamidoglycolate lyase [EC:
4.3.2.5
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Tsp_08245
Enzymes [BR:
tsp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.2 Amidine-lyases
4.3.2.5 peptidylamidoglycolate lyase
Tsp_08245
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Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
TcdA1_RBD_3
DUF6353
Motif
Other DBs
NCBI-GeneID:
10906809
NCBI-ProteinID:
XP_003373654
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MFLQQDKGPIRNDTVLVISPAGKLLKRWGGGLFYMPHGIYVDHKKKLWLTDVALHQVFRF
DFESNTEELILGKRFIPGGNLELFCKPAAVAVSKDGLVFVADGYCNSRVMKFSYDGKFLQ
AIDLYTIEGHRNALDYMQVVHSLAINDEKQELLVTDRENSRLVIFKFNGTFSGFIREKHM
RGALYGVTYCPKMNVFYVINNQLSRETVAPVEIRVFAFESESYRLLYSFKPDNFDFKNTH
SIACSLNCSNIYISHGLPNTVLKFNIHAISSPIHVERNVDNANLLMESRNELSLFDSHTF
YTTVILCMVAAIILAMAIAAIMVGCRVLNRRQGSTNRDKSNHPLLKNSKWRQGFQPLSTE
DIDAVDYTSDDSDDREDLLYSSSQMRKTSDL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttcaacaagacaaaggtccaattcgaaacgacacggtacttgtcataagccct
gctgggaagttgttgaaacgctggggtggtggcttattctacatgccgcatggaatatat
gtggatcataagaaaaagctgtggcttacggacgtcgctttgcatcaggtgtttcggttt
gattttgaaagcaacacggaagagttgattttgggcaaacgtttcattccgggcggtaat
ctggaattgttttgcaagccggccgccgttgcagtttccaaagatggtttggtttttgtc
gccgatggatattgcaatagtcgagtgatgaaattcagctatgatggcaaatttttacaa
gctattgatctgtatactatcgaaggtcatcgaaacgcacttgactacatgcaagtagtg
cattcattggcaattaatgatgaaaagcaggaactgttggtcacggacagggaaaactcg
cgtttggtgattttcaagttcaacggcactttttctggatttatcagagaaaagcacatg
cgcggcgccctttacggtgttacctattgccctaaaatgaacgtattttatgtgatcaac
aatcaactgagtagagaaacggtggcaccagttgaaattcgggtgtttgcattcgagtcg
gaatcgtacagactgctttattcatttaagccggataattttgacttcaagaacacccat
tctattgcatgcagtttgaattgttcaaatatttatataagccatggacttccaaatacg
gtgttgaaatttaacattcacgcaatcagcagtcctattcatgtagaaaggaatgtcgat
aatgcgaatctgttgatggaatctagaaatgaattgtcgttgtttgattcgcacacattt
tacacaaccgtcatcttgtgcatggttgccgccatcattctcgccatggcaatagcagcg
atcatggtcggctgtcgtgttttaaatcgtcgtcaaggcagcactaacagagacaaatcg
aaccacccgttgttgaaaaattcaaaatggagacaagggtttcaacctctgagtactgaa
gatatcgatgcagtcgattacacctcggacgacagtgatgatagggaagatctactgtat
tccagttcgcagatgaggaaaacttctgacctgtga
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