Trichinella spiralis: Tsp_08247
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Entry
Tsp_08247 CDS
T01609
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
tsp
Trichinella spiralis
Pathway
tsp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Tsp_08247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsp02000
]
Tsp_08247
Transporters [BR:
tsp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
Tsp_08247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Rad17
AAA_23
AAA_29
SMC_N
RsgA_GTPase
MukB
Zeta_toxin
DUF4162
Motif
Other DBs
NCBI-GeneID:
10906811
NCBI-ProteinID:
XP_003373656
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MVEDIMKELNQLDLCGCSAYGAVVFEEGFLNEAGLGEELKYKIRLSNTPRNSQSRRGTWN
IGQASLFNVGHGWKTNALYAFPPQNGPRQSNSTDGGKPGYWREGFLILQHAIDKAIIRML
ASNVTDVDKFHVHLKRFVYPPYVDNPFITVIQQHLPRCLHLQNCGHGQRVARQGIYACDG
LEILGSFSGAFYLQLPQAGVHLDHVDAFPVHQHKRQENTGEIGPQRCVVLFLNLFGYVEV
QVRIGFIYSFVFVCHRRCAGNVVAGCTGLVWCSLYWPYFFIQPRYASVLRSTKLLTCLLV
NSAMSYGIQLIGILEGQNVGLQWYNLFHRGTMYNNLSMIEVIGMLLVDAVLCLSIAWYVE
AAKPRYNSIRQFISSKFCHKLFGSRRRKNSIGQVSSESSASNSAVGHFEDCDNPARVTIY
ENQSSGRKTAVEDLTLDLYYGQITALLGHNGAGKSTTISILTGVLAPSCGSVTINGMDMR
KHFDKIQTTLGYCPQYNPLFACMTVYEHLKFYCKLKGRQLMPTEVDRLLHLLNLESKRHS
LADHLSGGMKRKLCVAIALIGGSEVVLLDEPTTGMDPRARHDAWQLLLEEKQYRTMLLTT
HFMEEADLLGDRIAVLSNGTLQCCGTSFFLKRQFVAIVLQTGDGYRLKVIFKYAGKEKAE
QLLKLIEEYIPGAQLSNCIGTEAIYTVPLIKGPKLHALFASIEQKLDQYDVESFGLSIVT
MEEVFLRVSPKEPAVDNGQAHLSALADELDHSKQTGNTEQKKSVEQGLQVGQAAVLGVGG
EEDAGRGTQWSTVVGAVGRAGAVRRGGVGDQSLLARRTPLPRTASDSGDVRSDAHRRLQR
RTARRAPGRPVSASIRARTDRTVRPGSVRPALRGRGVVRSRLQRHRPLDGPFQQPAPARG
GRALPVADDGQRAVAGHRVRPAGQLVRSGRDGVQFGVQLGIRLLPVDRHVRAVLDYRTSV
RRQALAAAVPRRTGALLGRQLRLRFCCLLVYCFFCAAGVRRFRRRRADRRLALLAHAALV
RLVRLGDDTVHVRGVVFLRLCYRWIRQNDRL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagacattatgaaagaattgaatcagctcgacttgtgcggctgttcagcttac
ggtgctgttgtgtttgaagaaggattccttaatgaggcgggattgggagaagaattgaaa
tacaaaattcgacttagcaatacaccgagaaactcgcaatccaggcgtggcacttggaac
attgggcaagcgagtttgttcaacgtcggacatgggtggaaaacaaatgcactgtatgca
tttccacctcagaatggacctcgtcagagcaattcaacggatggtggtaaaccaggatat
tggcgagagggatttttgattcttcaacacgcaattgacaaagctattatccgtatgctg
gcttcaaatgttactgacgtggataaatttcacgtgcatctaaaacgatttgtttatccc
ccttacgttgataatccgtttatcaccgtgattcagcagcatctgcctcgttgtctacat
ctccagaactgtggtcatggacaaagagttgcgcgtcaaggaatatatgcgtgtgatggg
cttgaaattttgggttcattcagcggcgcattttatctgcaacttcctcaagctggcgtt
catctcgaccatgttgacgcttttcctgtgcatcagcataaacgacaagaaaatactggt
gaaatcggaccccagcgctgtgttgttctttttcttaatctattcggctacgtcgaagtt
caagttcgtatcggttttatttattcattcgtgtttgtttgtcatcgtcgttgtgcaggc
aacgtagtcgccggctgtacaggtttggtttggtgttccttgtattggccgtattttttc
atacagcctcgttacgcttctgtgcttcgatcgaccaaactgttgacatgtttgcttgtg
aattcagccatgtcttatggtatacagttgattggtatactcgagggtcagaatgttggt
ttgcagtggtataatttatttcatcgtggaacaatgtacaacaatttgtcaatgattgaa
gtgattggcatgctattggtcgatgctgtgctgtgcttgtcgattgcttggtatgtcgaa
gcggccaaacctcggtacaactcaatcaggcaatttatttcgtcaaaattttgtcataag
ttattcggcagcagacgaagaaaaaattcgattggacaagtaagcagcgaatcgtctgca
tcgaacagtgcagttggtcattttgaagactgcgacaatcctgctcgagtgacaatatat
gaaaatcaatcatctggcagaaaaacagctgttgaagatttgacgttggatttatattac
ggtcagattactgctctgcttggtcacaacggtgcgggcaaaagtacgaccatatcgatt
ctaacaggtgtgctagctcctagttgtggtagtgtcacaatcaacggtatggatatgagg
aaacattttgataaaatacaaacaactttgggctattgtccccagtataatccactgttt
gcttgtatgacagtttacgagcatttgaaattctactgcaagctaaagggaagacaactg
atgccgaccgaagtggatcgtttgttgcatttgttgaacttggagtcgaagcgccattcg
ctggctgatcacttgtcgggaggcatgaagcggaaattgtgcgttgctattgcattgatc
ggtggctctgaggtggtgctgttggatgaacctacgacaggcatggacccgcgcgcaaga
cacgacgcctggcagctgttgctcgaagagaagcagtacaggacgatgctgttgacaaca
cactttatggaagaagcggatttgctcggtgatcgaattgccgtactgtccaacggcact
ttgcagtgctgcggcacgagcttcttcctcaagcgacagtttgttgcgattgttctgcaa
acaggcgatggttaccgactgaaagtgattttcaaatatgccggcaaagagaaggcggaa
cagttgttgaaattgatcgaagaatacatcccgggcgcgcagttgtccaactgcattggc
acggaagcaatttacaccgtgccgttgatcaagggtccgaaattgcacgcgctttttgca
agcatcgaacaaaagctcgaccagtacgacgtcgaatcgttcggcttgtccattgttaca
atggaggaggtgtttctgagagtcagtcccaaagaaccggccgtcgataacggccaagct
cacctctcagcgctagctgatgaacttgatcacagtaagcaaactggaaacactgaacag
aagaagtcggttgaacaagggcttcaagttggccaggcagcagttttgggcgttggtggt
gaagaggacgctggacgcggtacgcaatggtcgactgttgttggtgcagtggggcgtgcc
ggtgctgttcgtcgcggtggcgttggcgatcaatcgctgcttgcccgacgaacgccactc
ccccgcactgcctctgacagtggagacgtacggtccgacgcgcataggcgtctacagcga
cgcacggctagacgggctcctggccgaccagtatcggcttcaattcgtgctcgaacggat
cgaactgtccgaccaggctctgttcgaccggcgctacgtggtcggggcgtcgttcgaagc
cggctccaacggcaccgtccacttgacgggccatttcaacaaccagcccctgcacgcggt
ggccgggcattgccggtcgctgacgacggtcaacgagccgttgccggccaccgagttcga
ccggctggtcaattggttcgaagtgggcgtgacggagttcaatttggcgttcaacttggt
attcggcttctccctgtcgacaggcacgttcgtgctgttctcgattaccgaacgtcggtc
cggcgccaagcacttgcagcagctgtgccacgtcgaaccggcgctcttctgggtcgccaa
cttcgtctgcgattttgttgtttacttgtttactgttttttctgtgctgctggtgttcgt
cgctttcgacgtcgacgtgctgatcgacggctggcgttgcttgcacacgctgctcttgtt
cgtcttgtacggctgggcgacgataccgttcatgtacgtggcgtcgtttttcttcgactc
tgctaccgctggatacgtcaaaatgaccgtctttaa
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