Trichinella spiralis: Tsp_08280
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Entry
Tsp_08280 CDS
T01609
Name
(RefSeq) xylosyltransferase oxt
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tsp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Tsp_08280
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
Tsp_08280
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsp01003
]
Tsp_08280
Enzymes [BR:
tsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
Tsp_08280
Glycosyltransferases [BR:
tsp01003
]
O-Glycan biosynthesis
Glycosaminoglycan
Tsp_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
WSC
DUF2914
Motif
Other DBs
NCBI-GeneID:
10905705
NCBI-ProteinID:
XP_003375282
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MAAPKTNFKWFKRPLFVTARCNLSVETEKALKRAQSESCKQQIINAYCSHLKGSLYPAAL
HRSCPYEGVEFGEECFCGKVSNLKLGLKLETGFCETHPCPANSSTACGGFNAIAVYHTGY
KDPPKVKLKRSELLKVNTKPAKIAFLLQLNGRAVRQVVRLLRLIYRPEHIYLVHVDSRQN
HMYREMISLQKSISATNFHVLTRRFPTIWGGASLLKMFLSSADELLQLSSDWEYLVNLSE
SDMPLRPVDELASLLGNCNGTSFLRSHGDTTVAFVRRQGLGKLFVECDNHMWRLAERQLP
KGVRVDGGSDWLILHRSLVAYAVHEHDDQLVSGLRQFFQNALLPLETFFHTLAQNSPFCD
RIVNSNLKLTNWHRKRGCNCQHLNVVDWCGCSPNVFRMADWDRLRKVTKGGSGLQFFARK
FDPLIDLRIIVQLERTVANGNGDSAYPASSFPYWQNEFHHVDDQLQSLNPRMRRFFDYAA
HVGRRYLFQPTSCNAVQSVDCPVERVLQFNLFKQSNAELMDLLISIGGTCRSEPAAPLHE
VQEQQFKANASGGVVVVHLQKQIGLSEDGIWSVRVQMNNDELLAEMSFPVIDPNELLMEK
LARILDPFFSIKSACLIGKPNPIPVSSPHFFTCRIEKTNK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacctaaaacaaattttaaatggtttaaacgaccattgtttgttaccgcgaga
tgcaatctcagtgtcgaaactgaaaaggcattgaaaagagcacaatctgaaagctgcaaa
cagcaaataattaacgcctattgttcccatttgaaaggttcactgtatcccgctgcactg
catcggtcttgtccatatgaaggcgtcgaatttggtgaagaatgcttttgtggcaaagtg
tccaatttaaaacttggtctgaaactggaaactgggttttgcgaaactcatccatgcccg
gctaattcgtcgacagcatgcggcggtttcaacgcaattgctgtatatcatactggttac
aaagatccaccaaaggtgaaattgaaaaggagtgaattgttgaaggtgaacacaaagccg
gcaaaaatagcttttttacttcaactgaatggtcgtgctgtgagacaagttgtacgtttg
ttacgactgatataccgacctgaacacatctatttggtgcatgtcgattctcgacaaaat
cacatgtacagagaaatgatatcgttgcagaaaagcatttcagctacgaattttcacgtg
ctaacgcgacgatttcccacaatatggggcggtgcctcgttgttgaaaatgttcttatcc
agtgctgacgaactgttgcaactgtcctcggattgggaatatttggtaaatctcagcgaa
tcggacatgccactgcgaccagtggacgagttggcctcgttgctgggcaactgcaacggc
accagcttcctgagaagccacggcgacacgacggtcgctttcgtcaggcgccagggtctg
ggcaaattgttcgtcgaatgcgacaaccacatgtggcgcttggctgagaggcaattgccg
aaaggtgtacgtgtggacggtggatcggattggctgatcctacaccgcagcctggtcgca
tacgccgttcacgaacacgacgaccagctggtcagtggtttgaggcaatttttccaaaac
gctctgctcccgttggagacgtttttccacacgttggcgcaaaacagccccttctgcgac
cggatagtcaattccaatttgaaactcaccaactggcaccgcaagcgtggctgcaactgc
caacacttgaacgtggtcgactggtgcggctgcagtccgaacgtgttccgcatggccgac
tgggatcgtctgcggaaagtgaccaaagggggtagtggcttgcaattcttcgcacgaaaa
ttcgaccccttgatcgacctgcgaatcattgtccaactggaacgaacggttgccaacgga
aacggtgattcggcctacccagcgagctcatttccatactggcagaatgagtttcaccac
gtcgacgaccagctccagtcgctgaatccgaggatgagacgatttttcgactacgctgct
cacgttggtcgacgttatttgtttcaaccaacttcctgcaacgctgtccagtcggtcgac
tgtccagtggaacgtgtgcttcagttcaacctcttcaaacaatccaacgctgaattgatg
gacttgctgatcagcattggtggaacttgtcgatctgaaccagcggctcctctgcacgaa
gtgcaagagcaacagttcaaagcgaacgcatccggtggtgttgttgttgttcacttgcaa
aagcaaatcggtctgtccgaagatggcatctggtcggtgagagttcagatgaacaatgac
gagcttctggccgagatgtcgtttccggtcatcgatcccaacgaacttctaatggagaag
ttggcacggatcttggatccattcttttcgatcaaaagtgcctgcctgatcggcaaaccg
aaccccatccccgtcagctcaccgcacttcttcacgtgcagaattgagaaaacaaacaag
taa
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