Trichinella spiralis: Tsp_08314
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Entry
Tsp_08314 CDS
T01609
Name
(RefSeq) glyco protein hormone beta-5
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
HRI2_3H
SRP40_C
PK_Tyr_Ser-Thr
Kdo
Motif
Other DBs
NCBI-GeneID:
10905740
NCBI-ProteinID:
XP_003375317
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All DBs
Position
Unknown
AA seq
1186 aa
AA seq
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MSQQVTWRRLFAIICVGAQRVDADKSKEVAVRSKKASSSSDTSSDSSSDEECIVANKIVQ
SMKKATNAPYAAKVENNSSDDSDTESSDGEAASKKIAVQQVPSLPGALASKSPGMKETNK
VLNGSSVKKAAALNVSKALFLKRQMMAKQGESSDSSSSDSSDDEATVNTTATLNQKGKIN
MVAKKAVSKADEESSSDESDVQTTPIKKAFVPLKKPENLKSVPNKEEVKKLNKQQTHQLV
VGKFNKAATIQKAGKKVAASSDSSSSESSSSDEAAPLNKKSLNTVVQKKLPLHNKNDTSS
STDSSSSEDVETLKSVDQKAVALTSKTKAETDSSSESDSSSENPPPAKKQKQLNNRGIEP
KHPPTVVGKNIFGKKEQSSDSDSTTSSSSEEEVELKKEVKMIPMISRIAALSSSAVQRAA
SSSESDTSTSSEDDLAAAKPITKKTTQSVVSSNSSTLKNPKKTVRKSDSDTSDSSSSGDM
DLIDQVTKDKAVLSAAAFQTKKNLSSVQKEKVSDSESTSSSDDSSSDDELKDDDSSSSDD
DVQENAKTTGKITVVAKGGGKSVPGLVNSKKRVRDDVSSSSDSDEEKLNESQAKKQKIQP
SSLSSSHAQKKQETSDSSSTDSEKVELSNLKSKIITPMKHAKKNTNEKKMSSDSETTSSD
EEETQASSGEKSLSKGNDSGKVLKKKRPAASDDMNKSFNKSQNGQSEKKKKKMNESSNTT
DGYDEWGKKAYETFSTVKGKSFRKEKTKKKREPSPNCSPIPDALVQIAPKELGTVADGRW
SEDHIKFVLIALVEMVCCLTESNPEKQKKLFCVLSQTLVELGVSSCNLSLAWISLINDPK
ALKLYLQMELCSWTLKDWMDERNAAVKSNCCNLLYANYRKTKTSPFDLVNADVNEIILRQ
LVEAIQYIHSQNVMHRDLKPSNVFLSGQKPQVLLGDFGLACQFLSPEIWSEQENNNFTKV
EQQPQPTKQHSKAIGTSLYASPEQLKLSTYDNKAGIVSQLIQQQPALRPSAAELIRSGLF
KSEQDVRRPSEVVLRPTEKKELINNQPPQRTDEYFISLLYYANLLIFVSTLRALAILPEA
DVPALRNAVSIRPENIVQSIKAPNVRHTYAICRCAYKPTVIFFLNMLINTLQYCTVVCVC
AYIGISERKEVKNKLHYYTSSLIILIHPFIKFGLLLYLIKNTVDDN
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaagtgacttggagacgattgttcgcaattatttgtgttggtgcgcagaga
gttgatgctgataaatccaaagaagttgctgttagatcgaaaaaagcttcaagcagcagc
gacactagtagcgatagtagttctgatgaggaatgcattgtggccaataaaattgtacag
tcgatgaaaaaggcgacaaatgcaccttatgcagccaaagttgagaacaacagttcggac
gattcagacacggaaagctctgatggtgaagcggcgtctaaaaaaattgccgtccaacag
gtgccatctttaccaggggcattggcatcaaaaagtcctggaatgaaggagacaaataag
gttttgaatgggtcatcagtaaagaaagcagctgcgctgaatgtttctaaagcattgttt
ctgaagcggcagatgatggcaaaacaaggggaaagcagtgacagtagcagcagtgacagt
tcggatgatgaggcaacagtgaacacaacggcaactttgaatcaaaaaggcaaaataaat
atggtagcgaagaaggctgtcagcaaagcagatgaagagagttcaagcgacgaatcagat
gtgcagacgactccaatcaagaaagcatttgtacctttaaagaagccagaaaatttgaaa
tccgtcccgaacaaagaagaagttaaaaagttgaataaacagcaaacacatcagcttgtg
gtagggaaatttaacaaagctgcgacgatacagaaagcgggtaaaaaagtagctgcaagt
agcgatagtagcagcagtgaatcatcgagcagcgatgaagcggcgccgttgaataagaaa
agcttgaatacagtagtgcaaaaaaagttgccgttgcataataaaaacgatacatcatca
agcacggattccagcagtagtgaagatgttgaaacattgaagtcggttgatcaaaaagca
gttgcattgacatctaaaactaaagctgagacggactccagttctgaaagcgacagttca
tcggaaaatcctccgcctgcgaaaaagcagaagcagctaaacaaccgtggaattgaaccg
aaacatcctccgacggtggttgggaaaaatatttttggaaaaaaagaacaatcttctgac
agtgatagtaccactagcagcagcagtgaggaggaagtagaattgaagaaagaagtgaag
atgattccaatgatttcgaggatcgccgcactgtcgtcatctgctgttcaaagagcggct
tcatcatccgaaagtgatactagcacatcttctgaagatgatcttgctgctgcaaagccg
attacgaagaaaacgacacagtcggtagtcagcagcaacagcagcacattgaagaatcca
aaaaagactgtacgtaaatctgacagtgacactagtgacagtagcagcagcggcgatatg
gatttaattgatcaagtgacaaaagacaaggcagttctcagcgcagcagcttttcagacc
aagaagaacctttcctccgtacagaaagagaaagtatccgattcggaaagtacaagcagt
agtgatgatagctcttcggatgatgagcttaaagatgatgattcttcgtccagtgacgac
gacgtacaggagaatgcgaagacaactggcaagattactgttgttgcaaaaggaggtggc
aaatctgttcccggattggtgaacagtaagaaaagagtccgtgatgatgtgagttcgtct
tcagattctgatgaagaaaagttaaatgaaagtcaagcgaagaagcagaaaattcaacca
tcatcattatcatcatcacatgcacaaaagaaacaagaaacatccgacagttccagtact
gattctgaaaaagtggaattgtcgaatttgaagtcgaaaattattacaccgatgaagcat
gcgaaaaagaataccaatgagaagaaaatgtcgtctgattctgaaacaacatcatctgat
gaagaggaaactcaggccagtagcggtgaaaagtcactatcaaaaggcaatgatagtgga
aaagtgttgaagaaaaaacgacctgccgcatcggatgatatgaataaaagtttcaacaag
agccaaaatggtcagtcagaaaagaagaagaaaaagatgaacgaaagtagtaatacaacg
gatgggtacgatgaatggggtaaaaaggcgtatgaaactttttccactgtgaaagggaag
agttttcgcaaagagaaaacaaagaagaagcgagaaccgagtccaaattgcagcccaatt
cccgacgcgctggtgcaaattgccccgaaagagttgggcacggttgccgacggacgttgg
tccgaggatcatatcaaatttgtcctgattgctctggtcgaaatggtctgctgcctgacc
gagtcgaacccggaaaagcagaagaaattgttttgcgttttatctcaaactctcgtcgaa
ctcggagtaagcagttgtaatttgtcgcttgcttggatcagtctgattaatgatccgaaa
gctctgaagctttatttgcaaatggaattgtgctcttggacgttgaaagattggatggac
gaacgcaatgcggcggtgaaatcgaattgttgtaatttgctctatgcaaattatcgaaaa
acaaaaacttctccgttcgacttagtcaatgcggacgtcaacgaaatcatccttcgccaa
ttggtcgaagcgatccaatacatccacagtcaaaatgtgatgcatcgagatttgaagccg
agcaacgtgtttctcagtggccaaaaaccgcaggtgcttttgggcgattttggtttggct
tgtcaatttttgtctccggaaatttggtccgaacaggagaacaacaacttcaccaaagtt
gaacaacaacctcagccgacgaaacaacacagcaaagctattggcacttctctgtacgct
tcaccggaacaattgaaattgtccacatacgacaataaggcgggaattgtttcgcagttg
attcaacaacagccagctttgaggccatcagcggcggaacttattcgcagcggacttttc
aaaagtgaacaagatgtacgacgaccatcagaagtcgttcttcgtcctacagagaaaaaa
gaattaataaacaaccaaccaccacaacgtacggatgaatattttatttcattattatat
tatgcaaatttactaattttcgtttcgactcttcgagctcttgcaattttgcctgaagct
gacgttccagctcttcgcaacgctgtttcgattcggcctgaaaacattgtccagtcgatt
aaagcgccaaacgttcgtcatacttacgccatctgtcgatgtgcatacaagccgacggtt
attttttttttaaatatgctaatcaacacactccaatattgcactgttgtttgtgtttgt
gcgtatattggaatatcagaacggaaagaggtgaaaaacaaactacactattataccagt
agtctaataatactcattcatccatttatcaaatttggcctacttttgtaccttatcaaa
aatacggtcgacgacaattaa
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