KEGG   Trichinella spiralis: Tsp_08385
Entry
Tsp_08385         CDS       T01609                                 
Name
(RefSeq) GTP-binding protein YPT7
  KO
K07897  Ras-related protein Rab-7A
Organism
tsp  Trichinella spiralis
Pathway
tsp04137  Mitophagy - animal
tsp04140  Autophagy - animal
tsp04144  Endocytosis
tsp04145  Phagosome
tsp04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Tsp_08385
   04145 Phagosome
    Tsp_08385
   04140 Autophagy - animal
    Tsp_08385
   04137 Mitophagy - animal
    Tsp_08385
   04148 Efferocytosis
    Tsp_08385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_08385
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsp04147]
    Tsp_08385
   04031 GTP-binding proteins [BR:tsp04031]
    Tsp_08385
Membrane trafficking [BR:tsp04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    Tsp_08385
Exosome [BR:tsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Tsp_08385
  Exosomal proteins of other body fluids (saliva and urine)
   Tsp_08385
  Exosomal proteins of colorectal cancer cells
   Tsp_08385
  Exosomal proteins of bladder cancer cells
   Tsp_08385
GTP-binding proteins [BR:tsp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    Tsp_08385
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase nSTAND3 cobW AAA_24 AAA_7 AAA_16 AAA_22 Septin ATPase_2 NB-ARC PduV-EutP NACHT AAA_5 TniB NTPase_1 DAP3 ATP-synt_ab SRPRB MCM ABC_tran
Other DBs
NCBI-GeneID: 10904114
NCBI-ProteinID: XP_003375392
LinkDB
Position
Unknown
AA seq 146 aa
MATRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVVVDDRFVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLILNIFLSLCLETKLIWKITPLVLNEHSSGVHRKT
TFRILRFLLRKLSMSIWHFKKLHEMH
NT seq 441 nt   +upstreamnt  +downstreamnt
atggcaactcgtaagaaagttttattgaaagtgatcattctcggcgacagtggggttgga
aaaacatcgctcatgaatcaatatgtgaacaaaagattcagcaatcagtataaagctact
attggagcagacttcttaaccaaggatgtggtcgtcgatgatcgtttcgtcacaatgcaa
atttgggatacggccggccaagaacgttttcagtcgcttggtgtagcgttttaccgtggc
gctgattgctgcgtacttatcctgaacattttcctttcattgtgcttggaaacaaaattg
atatggaaaatcacaccgttagtactaaacgagcacagttctggtgttcatcgaaaaacg
acattccgtattttgaggtttctgctaaggaagctatcaatgtcgatatggcatttcaaa
aaattgcacgagatgcattag

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