Trichinella spiralis: Tsp_08406
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Entry
Tsp_08406 CDS
T01609
Name
(RefSeq) putative general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_08406
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
Tsp_08406
TFIIIC, fungi type
Tsp_08406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_17
TPR_6
TPR_8
ANAPC3
HAT_PRP39_C
TPR_Slam
TPR_16
TPR_9
TPR_CcmH_CycH
TPR_20
TPR_15
ARM_TT21_5th
ARM_TT21_4th
BTAD
TPR_11
TPR_4
TPR_21
TPR-S
SHNi-TPR
TPR_5
Motif
Other DBs
NCBI-GeneID:
10904298
NCBI-ProteinID:
XP_003375412
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MRLHMRDCASKQAKRSWAVHEFSPLKMFLRKCEVKNFEIGKVKSITVDRVDIPDDFSPEI
LARVILAWLNLKHYNNALVELNNNILSGFYSSENVVFLQCLEDHYPMSMKYRDAYLLVMD
TYFFVHHYSQAVEIAERLVQDDVEVQLKYADFLIAINETNQALEIYERTMEKQPTQPLAR
LKLATLLQKLGRVEEAMEVLELFDKRGVDELGALDAELLYEQCQILGRKQLWSQYFISGK
HLMAMYFKEIQSQKCFAQIRNSYISRSANFRTCVLNTVANSPLKKLVNRVPEVGKFAKKL
ITGKQLWGVFDKLCDICIENEQYEELLHLTAFASQSMMLLKAGYLKKIDSRLLLAAVQCR
NVNVIWNVFRYCVAVVDENYYWNLLGMIFTMTQDVCSNRYILRQIALSPDCVPLAWINGN
NSLVAGSHQHALVEYFYVQLSHPDIPLINLLEGLSLLHMGSRRLMLRAQDCSIQALAVLS
RYKCLRGDCQEVYYNFGRAMQQLGIIHLAICYYRKVLQMEPEVKMTNNTNEGEYFLSNPF
DLRPLAAFNLSVIYFQSGNEMAALSLYNKYLQN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcatatgcgggattgtgcatcgaagcaggcaaaacgttcgtgggcagtgcat
gaatttagtcctttgaaaatgtttctacggaaatgcgaagtgaaaaatttcgaaattggt
aaagtgaaatcgataacagttgacagagttgacatccctgatgacttttcccctgaaata
ctcgccagagtaattttggcctggctgaatctcaaacattacaacaatgctttggttgaa
cttaacaataatattttgagtggtttttattcatctgaaaatgttgttttcctccagtgc
ttggaagatcattatcctatgtcgatgaaataccgcgatgcttacctgcttgtaatggac
acgtatttttttgtgcatcattactcgcaagctgtagaaattgccgaacgtttagttcaa
gatgatgtagaagttcagttgaaatatgctgattttttgatagcgatcaatgaaacaaac
caagctttagaaatttacgagcgtacaatggaaaagcaaccgacacagcctttggctagg
ctcaaattggccacgttgctgcaaaagcttggccgagtggaagaagctatggaagtgttg
gaattgttcgacaagagaggcgtggatgagctgggtgctttggatgcagagttgctttat
gaacagtgtcaaattttgggaagaaagcagctctggtcacaatatttcatttccggtaaa
catctcatggccatgtatttcaaagagatacaaagtcagaaatgtttcgcgcaaatacgc
aattcgtatatatctcgttcggcaaattttcgcacgtgtgtactgaatacagttgctaat
tcaccattgaagaaattagttaatcgagttcctgaggtgggaaagtttgcaaaaaaatta
ataactggaaaacaactttggggtgtattcgacaagctttgtgatatttgcattgaaaat
gaacagtatgaggaattgttgcatttgactgcatttgcctcgcaaagcatgatgttgctc
aaagctggttacttgaaaaaaattgatagccggcttttattggctgctgtgcagtgtcga
aatgttaatgtaatatggaatgtatttcgttattgtgtggcagttgttgatgaaaattat
tattggaatcttcttggtatgatttttactatgacgcaggatgtgtgctctaatcgatac
attttgcgtcagattgctttatccccagattgtgtacccttagcttggataaacggcaac
aattcattagtagctggctcgcatcagcatgcattagtggagtatttttacgttcaactt
tctcatccagacattccgttgattaatttactcgagggtctttcactgcttcatatgggt
agtcgtcggttgatgttacgtgcccaagattgttcaattcaagctttagctgtactttca
agatataaatgcttgcgtggagattgtcaagaagtttattataatttcggtcgtgccatg
caacagctgggcataattcacctggctatttgttattaccgcaaagttttgcaaatggaa
ccagaagtgaaaatgaccaacaatacaaatgaaggggaatactttttgtcgaatccattt
gatctgagacctctggcagctttcaacttgtccgtaatttacttccaaagtggaaatgaa
atggccgctttatcgctttacaataaatatctacaaaattga
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