Trichinella spiralis: Tsp_08442
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Entry
Tsp_08442 CDS
T01609
Name
(RefSeq) putative glycerophosphodiester phosphodiesterase 5
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
Tsp_08442
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
Tsp_08442
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
Motif
Other DBs
NCBI-GeneID:
10904336
NCBI-ProteinID:
XP_003375450
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MILKKTVNNHHNYRNLGCASFNVVPGLCCGESIRVASRWLTFILTSAFAGFESAFISGSH
DLLGKWNPSAGLPMVKDTIEENKWYIQIMLPVGEKIQYRFFSAISEPRTSLANPRHFITH
YEGSSHPREIFLSDESETRIILCEFGEFEKQAFENSGWLTCQNEVLLTIDASMVRFMHPQ
KLHHVHLKVGAFRTMSSYDPQFSVEENTYDDFQESCWPSWYSHFKSHDCAFKENRNEMLS
ITPRDIWIFKAQFFTTDESIFKVEFFSISDEEGDSPVVEQIGTAIVLTSALQNYRGSIKL
PICDVKNKVVGSFVAELLIIKPITDIKQTLECGFTEVKKKHNRTMNIGHRGVGQSCAKPC
TLPENTIASFKAATLSGADFVEFDVQMTKDWLPVVYHDFFVKIWARKRPSNRTLNLNDHD
DFSVQTIAVSDLTKDELDMLMMVDEQKFANRSDVQGNLIKDSEVDAELLPFPLLIQVLQH
QSLPSCVGFMIEVKYPQKLKCGCSELYENYTERNAYVDVIVTDVLKNAHQRKIIFSSFDP
DVCLMLKIKQNRYPVLFLTQGDNSRYEIYEDWRTWSSDTAVKFAFVHDLAVSGVAFHSEE
LLSNIAPYRRALKLNLATFVWGDDLDESRHREYFRNLHFDELIVMALFERFRREIGFACL
LYVDQIVHNIFCVVICESMQIEKSNFTN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgattttaaaaaaaaccgtaaacaatcaccacaactaccgtaaccttggttgcgcaagc
ttcaacgttgttccagggctttgctgcggtgaatcgattcgagttgcgtcacgctggctt
acgttcatcttaacatcagcatttgctggatttgaatcggccttcatatcgggcagtcat
gatctactgggcaagtggaatccgagtgctggcttgcccatggtaaaagacacgattgaa
gaaaataaatggtatattcaaataatgttgccagtcggtgaaaagatacagtatcggttt
ttctcggcaatttctgagccgcgtacatcgctggcaaatccacgccactttattacccat
tacgaagggtcttcgcatccacgtgaaatattcctttcagatgagtctgaaactagaatt
attttatgcgaatttggcgaatttgaaaagcaagcatttgagaatagtggttggctgact
tgccagaatgaagtgcttttgacaatcgacgcttctatggtacgttttatgcatccgcaa
aaattgcatcatgttcatctgaaagttggcgcatttcgcaccatgtcgtcgtacgatcct
cagttcagtgttgaagaaaatacttacgatgattttcaagaatcttgttggccctcctgg
tattctcactttaaaagtcacgattgtgcatttaaagaaaatcgcaacgaaatgttgtcc
attacccctcgtgatatttggattttcaaagcacaattttttactactgatgaaagtata
ttcaaagtggaatttttttcaatttcggatgaggaaggtgattcaccagttgttgaacaa
attggtacggcgatcgtgctcacgtccgcattgcagaattatcgaggttcgataaaattg
cccatttgtgatgtgaaaaacaaagtggttggcagttttgttgctgaattgttgatcatt
aaaccaatcacagatataaagcagactttggagtgtggctttactgaagtcaagaaaaaa
cataaccgaactatgaacattggacacagaggagttggtcaatcttgtgcaaagccctgt
accctgcccgagaatactatagcttctttcaaagctgcgactctcagtggagcagatttt
gttgaatttgacgttcaaatgactaaagattggttgccagtagtttatcatgattttttt
gtcaaaatttgggcgagaaaacgtccgtcgaatcgtactttaaatttaaacgaccacgac
gatttcagtgtgcaaacaattgctgtcagtgatttaacaaaggacgaattggacatgcta
atgatggtggatgagcaaaagtttgccaacagatccgatgttcagggaaatttgatcaaa
gacagtgaagtggatgcggaattgttaccatttccgttgctcattcaagtgcttcaacac
cagtcgctccccagttgtgtcggcttcatgattgaagttaaatatccacaaaaattgaag
tgtggctgtagtgaattgtacgaaaattacacggaacgtaatgcttatgttgatgtgatt
gtaactgacgtgttgaaaaatgctcaccagaggaagataattttctcctctttcgatccc
gacgtatgtctcatgcttaaaataaagcagaatcgttatcctgttctatttctcacccaa
ggtgacaatagccgctacgaaatctacgaagattggcgcacatggtcctcagatacagcc
gtaaaatttgccttcgtccacgatcttgctgtaagtggtgtcgcttttcacagtgaagaa
ctgttgtccaatattgcaccgtatcgtcgtgctttaaagttgaatttggcaacatttgtc
tggggcgacgatcttgacgaatcgcgacatcgcgaatattttcgtaatttgcatttcgac
gaattgattgtcatggcgctctttgaacgattcaggagagaaattggttttgcatgcttg
ttgtacgttgatcaaattgttcacaacatattttgcgtcgtcatttgcgagagcatgcaa
attgaaaaatcaaatttcaccaattaa
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