Trichinella spiralis: Tsp_08576
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Entry
Tsp_08576 CDS
T01609
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tsp_08576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_08576
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Tsp_08576
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tsp_08576
Prokaryotic type
Tsp_08576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
10907010
NCBI-ProteinID:
XP_003373849
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MCTTASSLSPPPQKQLRLDSFFSNKCEKTTTTPERKSSPPVGKASDSRLEDLLLDPCWKR
RLGSEFSKAYFKDLENRLNEIWQKPQSVVFPPKHLIFNAFNLTPLKSVKAVILGQDPYHN
YGQAHGLSFSVPHGVTPPPSLKNIFKELADDIPGFRIPSHGCLTAWAKRGVLLLNASLTV
ECHKANSHAAFGWQDFTDFAIKTVSDHCFGVVFLLWGAFAHKKERLVDSKKHTIIKTAHP
SPLSQGRFFGCRCFSKTNEALKEYGKDAIDWTID
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacaacagcttctagtctttctcctccaccgcaaaagcagttgcgtttggattct
ttcttttcgaacaaatgcgaaaaaactactactacgccagagaggaaaagttcaccgcca
gttggcaaagcttcggactccagacttgaagatctcctgctggatccttgttggaaacgt
cgacttggttctgaattttcaaaagcttatttcaaagatcttgagaatcgtttgaacgaa
atttggcagaagccgcagagtgtggtgtttccgcctaagcatttgatcttcaatgcattc
aatttaacccctctgaaaagtgtcaaagctgtgattttgggccaagacccgtatcacaat
tatggacaagctcacggtttgtcattttccgttccgcatggtgtgactccgccaccttcg
ttgaaaaatatattcaaagaactggcggacgatattcccggtttcagaataccatcccac
ggttgtctgaccgcgtgggcgaagcggggagttctgctgctcaacgcatcgttgacagtc
gaatgccacaaggcgaattcacacgccgcattcggttggcaagatttcaccgactttgcg
atcaaaaccgtaagtgaccactgtttcggtgtggtatttctgctgtggggtgcgtttgca
cacaaaaaggaacgcttggtcgacagcaaaaagcacacaatcatcaaaactgcccatccg
tcaccgctttcgcagggtcgctttttcggttgcagatgtttttcgaaaaccaacgaagca
ttgaaagaatacggaaaagatgcaattgattggacaattgattga
DBGET
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