Trichinella spiralis: Tsp_08582
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Entry
Tsp_08582 CDS
T01609
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tsp
Trichinella spiralis
Pathway
tsp04136
Autophagy - other
tsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Tsp_08582
04136 Autophagy - other
Tsp_08582
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsp01002
]
Tsp_08582
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_08582
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_08582
Peptidases and inhibitors [BR:
tsp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
Tsp_08582
Membrane trafficking [BR:
tsp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
Tsp_08582
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
Tsp_08582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
10907016
NCBI-ProteinID:
XP_003373855
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
METMEQSMLDLSNINFERCFVEMEERDLFKSGGEVWIVGRVWQTQDFDDIKKEIRSRMWF
TYRKSFSPIGGTGPISDSGWGCMLRCGQMLLAQALICRHLGREWQWSPSCRDEAYVRILR
MFQDKKNELYSIHMIAKMGESEGKEIGKWFGPSTIAHVIKKLAIYDDWSSLAVHVAMDNV
IVQEDVKKLCSREVFDALRKRLLQEEPSEIVADWFEDARKDNKKVDCANLSSPWKPLLLI
LPMRLGLSELNPCYIPALKEFFACKYNIGMIGGKPNHALYFIGAYKDRLVYLDPHWCQTF
VDLDVSMDLFDDSSYHSAFILDISFNEIDPSLAIAFYINTEAEFDDFCTFAKQVCLVGNF
RCFSSGSMVQLFQVLQKYPNPLFEVLLRRPPTWPPFVPYVGEVCNKISGE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatggaacagagtatgcttgatttatcgaatataaattttgaacgctgtttt
gtggaaatggaagagcgtgatttgtttaaatcaggcggggaagtgtggattgttggtcgg
gtttggcagactcaagattttgatgacattaaaaaagaaattcgcagcagaatgtggttt
acttatcgtaaaagtttttctccaatcggtggaactggaccgatttctgattctgggtgg
ggttgcatgctgcgatgtgggcagatgcttcttgcacaagctttgatttgtcgtcattta
ggtagagaatggcagtggagtccgtcgtgtagggatgaagcatatgtgaggatattgcgt
atgtttcaagataagaagaacgaactttactcaattcacatgattgctaagatgggtgaa
tctgagggcaaagaaattggcaaatggtttggtcccagcacaattgctcatgttattaaa
aagctagccatatacgacgattggtcatcgttggccgttcacgtggccatggataacgtg
attgttcaagaagatgtgaaaaagctttgctccagagaggtcttcgacgctcttaggaaa
cgtctgctacaagaggagccgtcggagattgttgcggattggtttgaagatgcgagaaaa
gacaataaaaaggtggactgtgcaaatctgtcgtcaccttggaaaccgcttcttttgatt
ttaccaatgcgcctcggtttgagcgaactgaacccctgttacatcccagcgttgaaggag
tttttcgcttgcaaatacaacatcggcatgatcggcggcaaaccgaaccacgcgctttat
ttcatcggcgcttataaggaccgtttggtttatttggatccacactggtgccagacattt
gtcgacctggacgtcagcatggatttgttcgacgattcgtcttatcattcggcattcatt
ttggacatctcatttaacgaaattgatccatcattggcaatcgctttctacatcaatacc
gaagccgagtttgatgatttttgcacttttgctaagcaggtctgtttggtgggcaatttc
agatgtttttccagtggttcaatggttcaattgttccaggttttgcaaaaatatccgaat
cctctgtttgaagttttgctacggcgtccacccacttggccaccattcgtgccttacgtt
ggcgaagtgtgcaacaaaatatctggtgaataa
DBGET
integrated database retrieval system
