Trichinella spiralis: Tsp_08684
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Entry
Tsp_08684 CDS
T01609
Name
(RefSeq) serine/threonine-protein kinase RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tsp_08684
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tsp01001
]
Tsp_08684
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_08684
Enzymes [BR:
tsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Tsp_08684
Protein kinases [BR:
tsp01001
]
Serine/threonine kinases: Other
RIO family [OT]
Tsp_08684
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-40S particles
Kinases
Tsp_08684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
10907120
NCBI-ProteinID:
XP_003373957
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDNVCIVLDGQYNRIQKTALICNVNQEVTARLSERSDVQECLNEEKSNMAELYFPLVCGW
SDWRYLFKITSTLYAPLAFCIFCAGQPTDKTSTHSVPRLLLHCYERQSMDDSDVVCAHDG
EEKDENVTSGDARDFSEDVEESKLNKNMRQALEIHERNTDENKHRIRDKQDRATAELALD
LRTRMNIFKLIQRGYITAVHGCISTGKEANVYRASSKRGDVAVKVYRTSVMTFKDRDRYI
SSEFRYRRGYCRKNPRKKIKVWAEKEYRNLKRIDKVDIACPAPLAQLENVVLMKFLGEKE
KPSPLLKDVKLSAMEWDYHYQEICMTLRSLFNKCKLVHADLSEYNIIFHNMQLFIIDVAQ
AVEHDDSYALEFLRRDCKQLNKFFSKRGVTVLTVKELFQFVTDPIVKEDEAYFKFLELLE
FRQKQNSLSDKDAAKEAVDEEVFNLVHIEQKLSEVLTFEKDYESVQAGEQLDVFYPVVTG
MKDDLTGAKVSENSSSDLSDEWVVVGGEEAAASKKASSATECFGKGPSVSLNLRQRDESP
NTKKARKKLVKFEQRQKRQEKLRKYYKKRKQTLSKLAKRK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtctgcatagtgcttgacggacagtacaaccggattcagaaaaccgcactc
atttgtaacgtgaaccaagaagtaaccgctcggttgagtgaacgaagtgatgttcaggaa
tgcttaaacgaagaaaaatcgaatatggcagaactgtattttccgcttgtatgcggttgg
tcagattggagatatctatttaaaattacttcaacattatacgccccattagcattttgt
attttctgcgcagggcagcccaccgataaaacatcaacacattcagtccctaggcttctt
ctgcattgttatgaacgtcaatcaatggatgattctgatgtcgtgtgcgctcatgatggt
gaggaaaaggatgaaaatgtaacatccggtgacgcgagagatttctctgaagatgttgaa
gagtcgaagctgaacaaaaacatgcgacaggcgttggaaattcatgagcgaaatactgat
gaaaataagcatcgtattcgagacaagcaggatcgtgccacggcggaattagcacttgat
ttacgcacccgtatgaatatattcaaattgatacagcgtggttatatcactgcagttcac
ggatgcattagcactggtaaggaagccaatgtttatcgtgcgtccagtaaacgtggggat
gtggccgttaaagtgtatcgaacaagtgtgatgactttcaaagatcgtgacagatatata
tcttcagaatttcgttatcgccgtggttattgtcgtaaaaatcctcgtaaaaaaataaaa
gtatgggcagagaaggaatacagaaatttgaagcgaatcgacaaagtggatattgcgtgt
ccggcaccgttggctcagttggaaaatgttgtgttgatgaaatttcttggagagaaggag
aagccgtctccgttgcttaaagatgtcaaactttctgcaatggagtgggattatcattat
caagaaatttgcatgacactgcgctctttgtttaacaagtgtaaattggtgcacgctgat
ctgagcgagtacaacatcatctttcataacatgcagctgttcatcattgatgtagcacaa
gctgtggagcatgacgatagttatgcgttggaatttttgcgaagagattgcaaacagttg
aacaaatttttttccaaacgcggtgtcacagttttgaccgtgaaagagctatttcaattt
gtaactgatccaattgttaaagaggatgaagcttactttaaattcctcgaattgttggaa
tttcgtcaaaagcagaactctttgtccgataaggatgccgctaaggaagctgtggatgaa
gaagttttcaatttggtgcacattgaacaaaaattgtctgaggttcttacttttgaaaaa
gattacgaatcagttcaagcgggagagcaattggatgtattttatccagtagttacagga
atgaaagatgatttgactggcgcaaaagtatcggaaaattcatcgtctgatttgagtgat
gaatgggttgttgttggaggagaagaagcagcggcgtcgaagaaggctagctcggctacg
gaatgtttcggaaaaggtccatctgtatcgttgaatcttcgtcaacgggatgaatctccc
aacaccaagaaggcacgaaaaaagttggttaagtttgaacaacgccagaagcgtcaggaa
aagttgagaaagtactataagaagcgaaagcaaacgctgagcaagttggcaaaacgaaag
taa
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