KEGG   Trichinella spiralis: Tsp_08702
Entry
Tsp_08702         CDS       T01609                                 
Name
(RefSeq) putative DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
tsp  Trichinella spiralis
Pathway
tsp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Tsp_08702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_08702
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     Tsp_08702
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT Dapper BRCT_2
Other DBs
NCBI-GeneID: 10897717
NCBI-ProteinID: XP_003373975
LinkDB
Position
Unknown
AA seq 455 aa
MDRWKICCAVLTDLGCLQLASADKAVAIIQLKQLERIDGIDIRNQNSAFIEIHVARSDDD
FRILLPKTEFMTPAESKVRRYKHKNRMKFFTKKDFIPSAAEQCWDRVKIICYQPFRSIAY
GISFIRVKRLVNEDDSLLENGIYSREFRSRFSVRRLPSPPLADKWDHPHCYQSEVLRGDW
TADMNIQIFPRRFRCSDILFGIQILFVGFEKKAFENLCYKGKKMGAKIQSNWKDFVTHIV
FNPDTDFSKIQLYIGQSYIVKAEWIEDCFACKRHLCVQNYLHDLEKLEQQHMEAMKVAEM
AKFEEMEKVEELVKNHENSDDTESVWSWDSIYEKETESESDSGESLCMDYRYFTNELRDE
FLRQDKILKRTAIEAGEEVDISPGFVTECEEEDGKSAIVDYKFFAAQRRRDKLLRRNRKL
KRLVIEGGDLSPDFETGAKKMKKTNDNEVADLESS
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggaccggtggaaaatttgttgcgcagtacttacagatcttggttgtctgcagttggca
agcgcagataaagccgtcgcgataatacagctgaaacagttggagcgaatagatggaata
gatatccgcaatcagaattccgctttcatagagattcacgtagctcgttcagatgatgat
tttcgcattctgcttccaaagaccgagttcatgacacccgcggagagtaaagtgcgcaga
tacaagcacaagaatcgtatgaaatttttcaccaaaaaggatttcataccttcggcggcc
gaacagtgctgggatcgtgtaaaaataatctgctaccagccattccggtccatagcgtac
ggcatctcgttcatccgcgtgaaacgtttggtcaacgaggacgacagtctgctcgaaaat
ggcatatacagtagggaatttcgcagtcgcttttctgtaagacgattgccgtcgccgcca
cttgctgacaaatgggatcatccacattgttatcaaagtgaagtgctgagaggcgattgg
acagctgatatgaacatacaaatattccctcgaagatttcgctgttcagatatattgttc
gggattcaaatactattcgtcggttttgagaagaaagcattcgagaatttgtgttataaa
ggaaagaaaatgggcgccaaaatacagtcaaattggaaagactttgtcacacatatcgta
tttaatcccgatacggatttctctaaaatccaactttacatagggcaaagttacattgtc
aaagcagaatggattgaggattgttttgcttgcaaacgtcacctctgtgtccaaaattac
ctgcacgatttggaaaagttggaacaacagcacatggaagctatgaaagttgctgaaatg
gcaaaatttgaagaaatggagaaggtggaagaactggtcaagaatcatgaaaactcggat
gataccgagtcggtctggtcgtgggattcgatttacgagaaagagaccgaatcggaaagt
gacagtggagaatctctttgtatggattacagatacttcacaaacgaactacgagacgaa
tttttacgccaagacaaaatactgaaaagaactgccattgaggcaggagaagaagtcgac
attagtcctggttttgtgaccgaatgtgaagaagaagatgggaaatccgctattgtggat
tacaaattcttcgctgcacaacgacgacgagacaaacttttacgcagaaacagaaaattg
aaacgacttgtcattgaaggaggagacttgagtcctgatttcgagactggtgcgaaaaag
atgaagaagactaacgacaacgaagttgcggatcttgaatcatcataa

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