Trichinella spiralis: Tsp_08744
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Entry
Tsp_08744 CDS
T01609
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tsp
Trichinella spiralis
Pathway
tsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
Tsp_08744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsp02000
]
Tsp_08744
Transporters [BR:
tsp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
Tsp_08744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
10897759
NCBI-ProteinID:
XP_003374016
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKRLRKRLAAAGASEERLEWANKVEFLLAIIGFSVDLGNVWRFPYICYRNGGGAFLVPYF
VMFIFCGLPLFYMEMALGQFHRCGCISIWKRLVPLFKGVGYATCLIDVYMGCFYNTIISW
ALFYLSSSFKWPFPWQSCDNVWNTENCVPDNANVSLGNASSNYTNAAEEFFLRRVLEIQN
SDGLENLGNIRWPLLLCLLVIYTIVYFAIWRGPLSSGKAVWFTATVPYVALFALLAHSCT
LPGSQAGIKYFLMPDWSKLLNIEVWIDAATQIFFSLGPGFGVLIALASYNSRRNNFYRDA
IVAGCINSLTSILSGLVIFSVLGYMADCLNKDIAEVAETGGVNTHSCAENDLFHGFLFFS
KGPGLVFIVYPRAISTMKAAPIWSVIFFVMLVTLGVDSTFAGFEAILTAFCDEYPSVLEK
NRKVFAMFFMIAMFFLSLPTVTYVRVWEVSLSVDYFFSFQGRKLPY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattgagaaaacgtctggctgcagcgggtgccagtgaagaacgccttgaatgg
gccaacaaggtggaatttctgttggccataattggcttttctgtcgatcttggcaatgtg
tggcgctttccgtacatatgctatcgaaatggtggaggagcttttctggtcccatacttt
gttatgttcatcttctgtggacttccgttgttttatatggaaatggcattgggacaattt
catcgatgcggatgcatttccatatggaaacgactggtaccactttttaaaggcgtcgga
tatgcaacatgtttgattgatgtctacatgggttgcttttataacacgataatatcttgg
gcattgttctaccttagcagttcgttcaaatggccttttccttggcaatcttgcgacaac
gtgtggaatacggaaaactgtgtacccgacaatgcgaacgtatcattgggaaatgcatct
agcaattacacaaatgcagctgaagagttctttttacgaagagttttggaaatacaaaat
tctgatggtttggaaaatttgggcaatatcagatggcctcttttgctttgcctgcttgtc
atctacacaattgtttattttgccatctggagaggaccgctcagttcaggcaaagcagtg
tggttcactgcaacggttccctatgttgcgctgttcgctttgcttgcacatagctgcaca
ttgccgggatcacaggctggcattaaatacttcctcatgccagattggagcaagctgctc
aatattgaagtttggatcgatgctgcaacacaaatatttttttcactgggaccaggattt
ggagtattaattgcgcttgctagttacaattcaagacggaacaacttttacagagatgct
attgtggcaggttgcataaatagcttgacaagcattttatctggtctggtaatattttct
gtactgggatatatggccgactgcttgaataaggacattgccgaagtggccgaaacggga
ggtgtgaatactcattcatgtgcagaaaatgatttatttcatggttttctgtttttttct
aaaggacctggacttgtgttcatcgtttatccaagagctatatcaactatgaaagcggca
cctatttggtctgttatttttttcgtcatgcttgtcaccttgggtgttgacagtactttt
gctggttttgaagcaattcttactgctttctgtgatgaatatccttctgttcttgaaaaa
aatcgaaaagtttttgcaatgtttttcatgatcgccatgttcttcctcagcttgccaaca
gtgacttacgtacgcgtttgggaggtttctttatcagttgattatttcttctcttttcaa
gggaggaaattaccttattga
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