KEGG   Trichinella spiralis: Tsp_08756
Entry
Tsp_08756         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K20191  Hermansky-Pudlak syndrome 5 protein
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_08756
Membrane trafficking [BR:tsp04131]
 Endosome - Lysosome transport
  Others
   BLOC-2 complex
    Tsp_08756
SSDB
Motif
Pfam: Beta-prop_HPS5 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_2 WD40_WDHD1_1st RMC1_N WD40_Prp19 Beta-prop_WDR19_1st Beta-prop_ELP1_1st WDR55 Beta-prop_IFT140_1st Phage_P2_GpE
Other DBs
NCBI-GeneID: 10897771
NCBI-ProteinID: XP_003374028
LinkDB
Position
Unknown
AA seq 370 aa
MDQSSSFASNQPFPSVIIAELSDLSKRIRAENIAAKNFKFLCLSVSNSFLAIGCSTGLVL
LFHRFTRKIIKNDDPAEVEILATEASPVVKISLSPNECHLAYGTSDCFVHLLNLKNYTAN
NTALFKVKLTDCNQLTSFCWKHDSSELYVGCKSGAVYILTNKINSNEGFVKFFLHLDSSV
IQLDECDNLLFISTRHQNLIFNTSNFSLTEFGNWHKRANCGACAWKADFSTSLNVVAARR
RGKFCFSLKHPVDNALHFYQPKCVIFCKIIQPKKKFLISILNRHICIVDFSSLADLIFAY
SLGSKEVLSYDISGDDIFLLQTDGTVRKFTIILLNDICNALEKLFSSKCFSAAANLTVHF
IKQNQKYHHR
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggatcaatcatcgagctttgcatcgaatcagccattcccatctgtgattattgccgaa
ttgtcagatttgtcgaaacgaatcagagctgaaaatattgctgccaaaaatttcaaattc
ttgtgcttgtcagtttcgaattcttttctggcaattggctgttccactggactcgtttta
ttgtttcatcgttttacaagaaaaattatcaaaaatgacgatccagccgaagttgaaatt
ctggcaacggaggcttcaccagttgtaaaaatttcactatctccgaacgaatgccacctc
gcctatggaacatcagactgctttgtccacttgttgaatttgaaaaattataccgctaac
aatactgcattgttcaaagtgaaattaaccgactgcaatcaattgacctctttctgttgg
aaacacgattcatccgaattgtacgtcggatgcaaatcaggggctgtgtacattttgacg
aacaagatcaattcgaatgaaggatttgtcaaatttttcttgcatcttgacagtagtgta
attcaacttgatgaatgtgacaatttgttattcatttccactcgtcatcagaatctgatt
ttcaacacgtcgaacttcagtttgactgaattcggcaactggcacaaaagagcaaactgt
ggagcttgtgcttggaaagccgatttctccacttcgttgaacgttgtagcagctagacgc
cgtggaaaattctgcttctctttgaaacatcccgtcgataatgcgttgcacttttaccaa
ccgaaatgtgtaattttttgcaaaattattcaaccaaaaaagaaatttttgatcagcata
ctcaatcgacacatttgtattgttgatttcagctcactggcagatctaatatttgcttac
agtttgggctcaaaggaagtgctcagttatgacatcagcggtgatgatattttcctgttg
caaacagacggaaccgtgagaaaatttaccatcatcttattgaatgatatttgtaacgct
ttggaaaaacttttctcttcgaagtgcttttcagcagctgctaatttgaccgttcatttc
attaagcaaaatcaaaagtatcatcacagataa

DBGET integrated database retrieval system