Trichinella spiralis: Tsp_08756
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Entry
Tsp_08756 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_08756
Membrane trafficking [BR:
tsp04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
Tsp_08756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_2
WD40_WDHD1_1st
RMC1_N
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_ELP1_1st
WDR55
Beta-prop_IFT140_1st
Phage_P2_GpE
Motif
Other DBs
NCBI-GeneID:
10897771
NCBI-ProteinID:
XP_003374028
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MDQSSSFASNQPFPSVIIAELSDLSKRIRAENIAAKNFKFLCLSVSNSFLAIGCSTGLVL
LFHRFTRKIIKNDDPAEVEILATEASPVVKISLSPNECHLAYGTSDCFVHLLNLKNYTAN
NTALFKVKLTDCNQLTSFCWKHDSSELYVGCKSGAVYILTNKINSNEGFVKFFLHLDSSV
IQLDECDNLLFISTRHQNLIFNTSNFSLTEFGNWHKRANCGACAWKADFSTSLNVVAARR
RGKFCFSLKHPVDNALHFYQPKCVIFCKIIQPKKKFLISILNRHICIVDFSSLADLIFAY
SLGSKEVLSYDISGDDIFLLQTDGTVRKFTIILLNDICNALEKLFSSKCFSAAANLTVHF
IKQNQKYHHR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcatcgagctttgcatcgaatcagccattcccatctgtgattattgccgaa
ttgtcagatttgtcgaaacgaatcagagctgaaaatattgctgccaaaaatttcaaattc
ttgtgcttgtcagtttcgaattcttttctggcaattggctgttccactggactcgtttta
ttgtttcatcgttttacaagaaaaattatcaaaaatgacgatccagccgaagttgaaatt
ctggcaacggaggcttcaccagttgtaaaaatttcactatctccgaacgaatgccacctc
gcctatggaacatcagactgctttgtccacttgttgaatttgaaaaattataccgctaac
aatactgcattgttcaaagtgaaattaaccgactgcaatcaattgacctctttctgttgg
aaacacgattcatccgaattgtacgtcggatgcaaatcaggggctgtgtacattttgacg
aacaagatcaattcgaatgaaggatttgtcaaatttttcttgcatcttgacagtagtgta
attcaacttgatgaatgtgacaatttgttattcatttccactcgtcatcagaatctgatt
ttcaacacgtcgaacttcagtttgactgaattcggcaactggcacaaaagagcaaactgt
ggagcttgtgcttggaaagccgatttctccacttcgttgaacgttgtagcagctagacgc
cgtggaaaattctgcttctctttgaaacatcccgtcgataatgcgttgcacttttaccaa
ccgaaatgtgtaattttttgcaaaattattcaaccaaaaaagaaatttttgatcagcata
ctcaatcgacacatttgtattgttgatttcagctcactggcagatctaatatttgcttac
agtttgggctcaaaggaagtgctcagttatgacatcagcggtgatgatattttcctgttg
caaacagacggaaccgtgagaaaatttaccatcatcttattgaatgatatttgtaacgct
ttggaaaaacttttctcttcgaagtgcttttcagcagctgctaatttgaccgttcatttc
attaagcaaaatcaaaagtatcatcacagataa
DBGET
integrated database retrieval system