Trichinella spiralis: Tsp_09026
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Entry
Tsp_09026 CDS
T01609
Name
(RefSeq) putative proline--tRNA ligase
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00860
Porphyrin metabolism
tsp00970
Aminoacyl-tRNA biosynthesis
tsp01100
Metabolic pathways
tsp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Tsp_09026
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tsp_09026
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsp01007
]
Tsp_09026
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_09026
Enzymes [BR:
tsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Tsp_09026
6.1.1.17 glutamate---tRNA ligase
Tsp_09026
Amino acid related enzymes [BR:
tsp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Tsp_09026
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Tsp_09026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
10902663
NCBI-ProteinID:
XP_003382179
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MSGGSALGVQNGKNGGFEKRSAEETKLICAMYDEEASAEPSTSDHFLVFKQIDSWVEYAL
KLGEVQPNEQNALLLFLEKYLLERKSTNSLLTLNFPTVLQYSGNIVSNNVADAVWQLVEK
NCKTTENIGYSKKDEGKYVELPGAKQNEVVVRFPPEASGCLFRYLHIGHAKAAMLNQYYR
DIFNGKLIMRFDDTNPAKETEEFEELLEESKAYVDDTEPDLMKQEREQRKESRCRNNSLF
LFLFISNFNLSWKIFHHCVGVKRNMELWEEMKNGTTVGQRCCVRLKIDMDSDNGCMRDPT
IYRCKTEEHIQTKGKYKVYPTYDFACPIVDSIENVTHALRTTEYHDRDEQYFFILDALKL
RKPHIYEYSRLNLMNTVMSKRKLTWLVNEGIVEGWDDPRLPTVRGVLRRGMTVEGLKQFI
VAQGSSRSVVMMDWNKLWAFNRKVIDPIAPRYTALLKQSLVAVRIDEVHPHEKSVPKHPK
NSNIAGEKIVYYGNEIFIEQEDANLLKENDTITLINWGNAIVKKVVRTSGKVTSAALQLC
LENTNFKNTLKLTWLCEEDKREKQLIPIIASHFDNVISKAILGKDEDFKKFICRDSRHDF
EMVGEWAMCQINKGDIVQLQRKGFYICDQPYSASSPYTGLPSPLILFNIPDGHVKDLPTG
VMATKPASKKVESLQVQAGNVDKKSVVKMKEMQKKDKMEAKNDDLLVNKEVSLLLEIKHL
GDAIRKMKSESVEKAVVQVEVEKLKQLKADYELVTGKKWTPNLVNEISNQVDQLAKNDAD
QANQPGCDKTAMSSAEMLLKIKEVGDEIRRMKSDGLKKKEIESRVEILKQLKSDFEKLTN
QKWNPDLVNELSKRTTTATVETVESGTSSTVEQLDKLLLEIKSVGDDIRQMKSSGVDKKS
ISKSVEKLKLMKSNFEQLSGKQWTPDLVNAILNPPQSNSTEKKTTIDQLVEENKPDVVKK
PPKGSVKVEKQQNEVKKITRLGLETTKEGNFSEWYSQVITKAEMIEYYDISGCYIIRPWA
FAIWEAIQAWLDRQIKLMDVANCYFPMFVAWVTKSGQSEMSEPVAIRPTSETVMYSSFSK
WIQSHRDLPLKINQWCNIVRWEFKHPTPFLRSREFLWQEGHTAHANKDDAVKEVHDILDL
YARVYEELLAVPVIKGRKTDKEKFAGADFTTTIEAYIPTSGRGIQAATSHHLGQNFSKMF
DIVYEHPETQKKENVYQNSWGLTTRSIGVFTMIHSDNQGLVLPPAVAKVQVCKKIIFLSS
KMDSNVASVVVQVVIIPCGITSSLDKSVVKNIQDTCQLLNEELRSGEIRSMCDFRDNYSP
GWKFNHWELKGVPLRMELGPRDLNEKQVTLVRRDDGSKMTVSMIGFKADVIKQLLTNIQN
SLFSRAKAEMDNCTKVVEKWNDFCDHLEKRCLVMAPFCGAEVCEDLIKKDSTRMISESSF
SRDESTDPTAPSMGAKSLCIPFNQPKLLQKGEKKCVHPKCNQPAQFYTLFGRSY
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtggatccgcacttggcgtacaaaatggaaaaaatggcggttttgaaaagaga
agtgcggaagaaacgaaactcatctgcgccatgtacgacgaagaagcctccgctgagcca
tcaacatctgaccattttctggtttttaaacagatcgattcatgggtggaatatgcgctg
aaacttggtgaagtacaaccgaatgaacagaatgcgttgcttctatttcttgaaaagtat
ctgttggaacgaaaatctacaaatagtttactgacgttgaattttccaacagttcttcaa
tacagcggaaatatcgtttcaaataatgttgccgatgcagtttggcagttagttgagaaa
aattgtaaaacaacagaaaatattggatattcaaaaaaagatgaaggcaaatatgttgaa
ctgccaggagccaaacaaaacgaagttgttgttcgttttccaccagaagctagcggttgt
ttgtttagatatttgcatattggtcacgccaaggcagctatgctcaatcaatactacaga
gatatatttaatgggaaattgataatgcgttttgatgatacgaatcctgcaaaagaaacg
gaagaatttgaagaactgttggaagaatcgaaagcgtatgtggatgatacggaacctgat
ctgatgaaacaagaacgtgaacaaagaaaagaatcaagatgtcgaaataatagtttgttt
ttgtttttgtttatttcaaatttcaatttgtcatggaaaatatttcatcattgtgtaggt
gtaaaaagaaatatggaactgtgggaagagatgaaaaatggtacaactgttggtcagagg
tgttgtgtaaggttgaaaattgatatggattcggacaacggttgtatgcgcgatccgaca
atttatcgttgcaaaactgaggagcatattcaaactaaaggcaaatataaagtttatccg
acgtacgactttgcgtgtccaattgtcgatagcattgaaaatgtcacgcacgcccttcga
actacagaataccatgatcgtgatgagcaatatttttttattttggatgctttgaaattg
agaaagcctcacatttatgaatacagtcgtttgaatttgatgaatacagtgatgagtaaa
cgaaagctcacctggttggtgaatgaaggaattgttgaaggatgggatgatccccgtttg
cctactgttcggggggttcttcgtcgtggaatgaccgtcgaaggtctcaaacagtttatc
gttgctcagggatcttccaggtctgttgttatgatggattggaacaaactgtgggctttt
aatagaaaagtaattgatccaatagctccgcgttacactgcattgttgaagcagagttta
gttgcggttcgtattgatgaagtgcatccacatgaaaaatcagttccgaaacatccgaaa
aatagcaatattgctggtgaaaagatcgtttattatggaaatgaaattttcattgaacaa
gaggatgcgaatttgttgaaagaaaatgacacgatcactttgataaattggggaaatgcg
attgtgaaaaaagttgtaagaacttctggcaaagttacgtcagctgcgttgcagctttgt
ctagagaatacgaattttaaaaacacactcaaattgacttggctgtgtgaagaggacaag
cgagaaaaacagctcattccaataattgcttcacatttcgacaatgtaatatcgaaagca
attctgggcaaagatgaagatttcaaaaagttcatctgtcgtgattctaggcatgatttt
gaaatggtcggcgaatgggcaatgtgtcaaataaacaagggtgatattgtacaattgcag
aggaaaggattttacatttgcgaccaaccgtacagtgcatccagtccgtacactggtctg
ccttcacctttgattcttttcaacatacccgatggccatgtgaaagaccttcccactggg
gtgatggcgacgaaaccagcttctaaaaaagttgaatcattgcaagtacaagctggtaac
gttgataaaaaatccgtggtaaaaatgaaagaaatgcaaaaaaaagataaaatggaagcg
aaaaacgatgatctgctggtcaacaaggaagtttcgttgttgcttgaaatcaagcatttg
ggcgatgcaattcgcaagatgaaaagtgaaagcgttgaaaaggctgttgtgcaagttgaa
gttgagaagttgaaacagttgaaagcagattatgaattggtaacgggcaaaaagtggact
ccaaatttggtgaatgaaatttcgaatcaagtcgatcagttggcaaagaatgatgccgat
caggcaaatcagcctgggtgtgataaaacggccatgtcttctgctgagatgttgttgaaa
atcaaagaagttggagatgagatacgtcggatgaaaagtgatggacttaaaaaaaaagag
attgaaagtcgagtggaaattttgaaacagttgaaaagtgattttgaaaaattgacaaat
caaaaatggaatcccgatttggtgaatgaattatcgaagagaacaacaacggcgaccgtt
gaaacggtcgaaagtggaacttcttctactgttgaacaattggacaaattgcttcttgaa
atcaaatctgtcggcgatgatattcgacaaatgaaaagttctggagttgataaaaaatct
attagcaaatcggttgaaaagttgaaacttatgaaaagtaattttgaacagttgtcagga
aaacaatggactccggatttggtgaacgcaattttaaatccaccacagtcgaatagcaca
gagaaaaaaactaccatagatcagcttgttgaagaaaataaaccggatgttgtgaaaaaa
cctcctaaaggaagtgtaaaagttgaaaagcagcaaaatgaagtgaaaaaaattaccaga
cttggattggaaactactaaagaagggaatttttccgaatggtacagtcaagtgattaca
aaagctgaaatgatcgaatattacgatataagcggctgttatattattcgaccttgggct
tttgcaatttgggaagcaattcaagcttggcttgatcgtcagatcaaactgatggacgtg
gccaattgttattttccaatgtttgtcgcttgggtgaccaaatctggacaatccgaaatg
tccgagccggtggctattcgaccaaccagcgaaaccgtcatgtattcaagtttttctaag
tggattcaatcgcaccgtgatctaccgttgaaaattaatcaatggtgcaatatagtgaga
tgggaatttaaacatccgacgccatttttgcgtagtcgggaatttttgtggcaagaaggt
cacacagcccatgcgaacaaagatgacgccgtcaaagaggttcacgatattctcgacttg
tacgccagagtttacgaagaattgttggctgtgccggtgataaagggacgaaaaactgat
aaagaaaaatttgccggtgccgattttacaactacaattgaagcttacattccaacttct
ggacgagggattcaagcggccactagtcatcatctggggcagaatttttccaaaatgttc
gacatagtctacgagcatccggaaacgcagaaaaaggaaaacgtctatcagaacagttgg
ggtttgacgacgcgttcaattggtgttttcaccatgatacacagcgataaccagggtctg
gtgctgccaccggcagttgcgaaagttcaagtatgtaaaaaaataatttttttgtcttca
aaaatggactcgaacgttgcttctgttgttgttcaggttgtcattattccttgtggtatt
accagctctttggacaaatcggtcgttaaaaatatccaagatacgtgtcaacttttgaat
gaagaattgcgaagtggtgaaattcgcagtatgtgtgattttcgtgacaattattcacca
ggatggaagttcaatcactgggaattgaaaggtgtaccgttgagaatggaattaggtccg
agggatttgaatgagaaacaagtgacattagttcgcagagatgacggatcgaagatgacc
gtctcgatgataggattcaaagcggatgttataaagcaactgttgactaatatacagaac
agtttgttcagtcgtgccaaagcagaaatggacaattgcacaaaagttgttgaaaagtgg
aacgacttttgcgaccatttggaaaagagatgtctcgtgatggcgccattttgcggtgct
gaagtctgcgaagatcttatcaaaaaagatagtactagaatgatctctgaatcttctttt
tcaagagatgaatcaacggatccaacagctccgtcaatgggagcaaaatctttgtgcatc
ccattcaatcagccaaagctgctgcaaaaaggcgaaaaaaaatgtgttcatcccaaatgc
aaccaaccggctcaattttacactttgttcggtcgtagctattga
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integrated database retrieval system
