KEGG   Trichinella spiralis: Tsp_09089
Entry
Tsp_09089         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K14791  periodic tryptophan protein 1
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsp03009]
    Tsp_09089
Ribosome biogenesis [BR:tsp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    Tsp_09089
  Pre-60S particles
   Other pre-60S particles
    Tsp_09089
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40_Gbeta WDR55 Beta-prop_Aladin Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 10902812
NCBI-ProteinID: XP_003382246
LinkDB
Position
Unknown
AA seq 505 aa
MTTLTKTMAVNTTNNTARKLSSCNFSGHKEQLVQVNMKQVTCLAWVPRGIPALKPRKAEL
NSNQLGDWEDTKSDALTNMSSEDERFSDSDDTCADLENSDDVENAIKEVPAVDIFPDIAD
SAQSHPNESISDDEDEDFLLKADDNLVLFGCCVDNVENILEVHVYNEAEDSFYPHHHYML
EEAPLCIEHVIFNKDTRDKGNFCAVGTMDSAIELWNLDVVEAIEPVAIFGIRNQSSETEK
KKTTNAQTFRHKLRRVWVSETLSVAVVNKKISHEDGVLSLTWNRILSHILASGSADFQII
LWDIENQLGSAVLSGHSDKVQSIKWHPTESSRLLSGDTSGVVKLWDARESVCEKEWNEFN
AEIERVAWNPWKSENFFKEIEIQVAASDGRLYNMDIRSGIVDVTEAHNGAVLGRNKVVYL
DIDTDPLNGLSVNNKAENYVMTSSARGSLKLWKLDDNGHFKLSKKYKLKMNDLLCCEFCP
DEESVAACGGENGCKIISWNIGSAA
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgacaacgctcacaaaaacaatggccgtcaacacaacaaacaacactgctcgaaaacta
agcagttgtaattttagtggacataaggaacaactcgtccaagtgaatatgaaacaggtg
acttgcttagcatgggtgcctaggggaattcccgcattgaagcctcggaaagctgagttg
aatagtaatcaactgggtgattgggaagatactaaaagcgatgcattaaccaacatgtct
agtgaagatgagagattcagtgacagcgatgacacctgtgcagatttggaaaattctgat
gatgttgaaaatgcgatcaaagaagtacccgcagttgatattttcccagatattgctgat
agtgcacaaagtcatcctaatgaaagcatttcggatgatgaagatgaagattttttatta
aaagcagacgataatttagttttatttggatgttgcgtggataacgttgaaaatatactg
gaagtgcatgtttacaatgaagcagaagatagtttttatccgcatcatcattacatgctc
gaagaggctccgctatgcattgagcatgttatttttaataaagataccagagataaaggt
aatttttgcgccgttggcacaatggattctgcaatagagttgtggaatttggatgttgtc
gaagccattgaaccagttgctatttttggaattagaaatcaaagcagtgaaacggagaaa
aagaaaacaacaaatgcacaaacatttcgtcacaaattacgtcgagtttgggtttctgaa
actttatctgttgcagttgtcaacaaaaagatttcccacgaagatggagttttatcactc
acatggaatagaattttgagtcatattttggctagcggctctgcagattttcagatcatc
ttatgggatatcgagaaccaacttggctctgctgtactctctggtcattcagataaagtc
caaagtatcaaatggcacccaactgaatcaagccgactgctttctggtgatacatctggc
gttgtaaaattgtgggatgcaagagaaagcgtttgcgaaaaggaatggaatgaattcaac
gctgaaattgagcgtgttgcttggaatccttggaaatcagagaatttttttaaggaaatt
gaaattcaggtagctgcatctgatggtcgattatacaacatggatattcgcagcggtata
gtagatgtcacggaggcgcacaatggcgctgtattaggtagaaataaagtggtctatttg
gatattgacactgatccattgaacggattgtctgtaaataacaaagctgaaaattatgtg
atgacaagcagcgcacgaggatcattgaaattgtggaaactagatgataatggtcatttt
aaactttccaaaaaatacaaattgaaaatgaatgatctgctatgctgtgaattttgtcca
gacgaagaatccgttgcagcatgtggcggtgagaatggatgcaaaattatttcttggaat
ataggatcagcagcataa

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