Trichinella spiralis: Tsp_09220 Help Entry Tsp_09220         CDS       T01609                                  Name (RefSeq) hypothetical protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism tsp  Trichinella spiralis Pathway tsp04140   Autophagy - animal tsp04148   Efferocytosis Brite KEGG Orthology (KO) [BR:tsp00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     Tsp_09220    04148 Efferocytosis     Tsp_09220  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tsp04131]     Tsp_09220 Membrane trafficking [BR:tsp04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     Tsp_09220 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH Clathrin KilA-N Motif Other DBs NCBI-GeneID:  10904854 NCBI-ProteinID:  XP_003375643 LinkDB All DBs Position Unknown AA seq 791 aa AA seqDB search MFEAYSVIPVAQKLPLTVDSLTSHSNYIFATVFNNRIFPLTIAEHCVLAGTKSGFLLRYS ARKSLTTSHHDSANLAEYDFQVCKTFSKKPVVQLKSLPMKNLLLSLTDNLVQVHDLTQAT FPVISVVPKSKNATFFTTCLYQAECNGTEHCFDEGGSVLLVVVVRRRCQLYTLKGTEFVE FSVLPEVAFADTIRHVALLDSYMVAVVRDEYFHITLNGDKAGVTSGTVRSLFTISSTSKN SEPMISVLWNRRIFAVKRGDETFFLHDDGSLALNDGYENIHWSEIPSFIEYDRVYLLASL SKSIEIRSVKPSMLIQVIDMTKLKLITWSFRGCLYVLSNPASNQSDLYCLNGCENAKINL QYLIKEKKYELAVQVAESMINDRGIEREKRIRDVKNLYAFHLFTQRRFQEAFDIYSETRA EVLYVIGLFPDLLPEEIRKTITYPGNLPTDLPNSDMQAGISALTAYLSENNDMLISSLLR LPDNSCNVVESENLLKKHHKYSELFLLYERKSMHRQALELLKEQADEGTLPDCLDRAVNY LQDLGMQHFDLILEYAKWISDKNADLCIKIFTEDSEAVRSLDRHRVLEFIQRECPEQAVT YLEHVIGNWHDDSEKLHCTLAKLYVKMVKGMYAIYNSEVPEGRVRDCRPPNLVHYENTLL AFLKRSNFYNPEMLLVQLPFNEMHEARALIFEKLGRHEQVLAIYANMLGDFEKAEQYCHQ YYQPGSTLFLTLFQYYACPPDNSILGIGYASVPAPPANVPLALRVLTEYCGFMDPRKVII TVQSRICNFHV NT seq 2376 nt NT seq  +upstreamnt  +downstreamnt atgtttgaagcttattctgtaattccagttgcccaaaaacttcctttgactgtggattcg ttgactagtcacagtaattatatttttgcaacagttttcaataatcgaatctttccttta acaattgcagaacactgcgtattagcaggtaccaaaagtggtttccttcttcgttactca gctcgcaagagcttaactactagtcaccacgattcagctaatttagcagaatatgatttt caagtttgcaaaacattttcgaaaaaaccagttgttcaactgaaaagtctgcctatgaaa aatcttttgctttcccttactgataatcttgttcaagtgcatgatttaactcaggctaca tttccggttataagtgttgtgccaaaaagtaaaaatgccactttttttacgacttgcctt tatcaagcggaatgcaacggcactgaacattgttttgatgaagggggaagtgttctgcta gttgtcgttgtacgtcggagatgtcaactgtatacgctgaaaggaaccgaatttgtcgaa ttttctgttttgcctgaggttgcttttgctgatacgattcgtcatgtggcattgttagat tcgtatatggtcgccgtggtgagagatgaatattttcacataactttaaacggtgataaa gcgggtgtaacttctggcacagtgcgatcattatttacaattagcagcactagcaaaaac agtgagccaatgattagcgtactttggaataggcgtatttttgccgtcaaacgtggggat gaaacgttctttttacatgatgacggttcattggcattgaatgacggttacgaaaatatt cactggtcagagataccttcttttattgaatacgatcgcgtttatttgttagcttcgtta tcaaagtcaattgaaatacgatcagtaaagcccagcatgctaatacaagtaattgatatg acgaaactgaaattgatcacgtggtcattcaggggttgtttgtatgtattgtccaatcct gcttcaaatcagtcagatttatactgccttaatggatgtgaaaatgcgaaaataaatttg caatatctgataaaggagaaaaaatatgaacttgccgttcaagtggccgaatcgatgata aacgatcgtggtatagaaagggaaaagcgaattcgtgatgtgaaaaatctgtacgcattc catttattcactcagcgtcgatttcaagaagcgttcgacatctacagcgaaactcgagct gaagttttgtacgtgatcggattgtttccggatctgttgccggaagaaattcgcaaaaca ataacttatccgggcaatttgccaaccgatttgccgaacagtgacatgcaagctggtatt tcagcgcttactgcctatttgtctgaaaataacgatatgctcatctcatcgttgttacgt ttgcctgacaatagttgtaatgttgttgaaagtgaaaacttgcttaaaaagcatcacaag tacagcgaactgtttttgctttatgagagaaaatcgatgcatcgtcaggcactggaattg ttgaaagagcaagctgacgaaggcacgctgcctgattgtcttgatcgtgcggtcaattat cttcaagatttgggaatgcagcatttcgatttgattctcgaatatgccaaatggatatcg gataaaaatgccgatttatgtataaaaatttttacggaagattcagaagcagttagatca ttggataggcatagagttttggaatttattcaacgagagtgtcccgagcaggctgttact tatttggaacatgtaattggtaattggcatgatgacagtgaaaaattgcactgtacattg gccaaattgtacgtgaaaatggtgaaagggatgtatgcaatttacaacagcgaagttccc gaaggcagagttcgagattgccgaccaccgaatcttgttcattatgagaacacgttactt gccttcttgaagcggtccaatttttataatcctgaaatgcttcttgttcagttacctttc aatgaaatgcatgaagcaagggctttgatatttgaaaagcttggtcgccatgagcaagtt ttggcgatctacgcgaatatgttgggagattttgaaaaagctgaacaatactgtcatcag tattatcaaccgggatcgacgctttttctcactttgttccaatattacgcttgccctccg gacaacagtatacttggaattggatacgcatcagtgccagcacctccagcaaatgtacct ctggctttgcgcgttcttactgaatattgtggtttcatggatccacggaaagtaataatc actgttcaaagtagaatttgtaattttcacgtctag

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