Trichinella spiralis: Tsp_09265
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Entry
Tsp_09265 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03082
ATP-dependent chromatin remodeling
tsp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Tsp_09265
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
Tsp_09265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_09265
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsp03037
]
Tsp_09265
Enzymes [BR:
tsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tsp_09265
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
Tsp_09265
Chromatin remodeling factors
SRCAP complex
Tsp_09265
INO80 complex
Tsp_09265
INO80 complex (yeast)
Tsp_09265
SWR1 complex
Tsp_09265
ASTRA complex
Tsp_09265
Cilium and associated proteins [BR:
tsp03037
]
Motile cilia and associated proteins
Dynein assembly factors
Tsp_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
CUT_N
mTERF
AAA
RuvB_N
AAA_22
TIP49_C
AAA_16
Zona_pellucida
bpMoxR
AAA_25
AAA_19
AAA_5
DnaB_C
Mg_chelatase
nSTAND3
IstB_IS21
AAA_28
ResIII
AAA_18
AAA_7
Zeta_toxin
SLFN-g3_helicase
Parvo_NS1
AAA_11
TsaE
Motif
Other DBs
NCBI-GeneID:
10905062
NCBI-ProteinID:
XP_003375687
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MSRTILYETTSKMNDFDIDYRRFKSNEVLVPNRGSTYAVNVANEMEDSSENISAKFPYMY
DLLGLKFPLDSAENIDCFQSFIIRNIQSTWKKGSSSLNRRFLNIMTVDILTTNVRTQRVA
AHSHVKGLGLETDGRAKQIGSGFVGQVEARTAAGVIVDLVKMKRMAGRAVLLAGPPGTGK
TAIALAIARELGSKVPFAPMVASEVYSMEVKKTEVLMENIRRCIGYETRLTNLTVGLRTT
KGCTQLKLDPTLYDVFLQQRIEVGDVIYIETNSGAVKRVGRCDVYATETDLEAEEFVPLP
KGEIRKQKEFVQDVTLHDLDTANAKPSVSVKQRNNCSSIFTLIYLENLRKEVNASVNRYI
EQGIAELVPGVLFIDEAHMLDMECFTYLHRVIESSFSPIVILATNRGFSKIRGTEIVSAH
GIPQDLLERLLIVKTLPYGLQEILEIVKIRAKAENVNITGEALQSLAEIGYRASLRMWQQ
SFVAFRLFNCAIIRPRCCCSSRQLREIENRLFMVNSVESACESDFPTEKIAKEDFETNRQ
FLPAYNSKYKPRRYFRSYTLAPFVNDSELLRNFVEIGVDLSKLESRSNAVDFLVKLDWKN
DVQPMLRFLVLNGIPLEEIGQYLTRNPWIFQQNLQHLSDRIGYLKSKAFTVDAIAHIINK
ARYWLNFDIQTIDSRLGWLQINFKLTGDEVRDVVTKEPKLITFGTGYVQRLQFTFGQEMG
FTKIQTKQLLIKDPKLYITYRSVLMKSFDYLHNVVGFSHETILSWPRCLRESSYKARARH
QFLKRLKRDQFDPQRPNYVTVEAMLSGDDGEFCARVAKCPEAVLSTASLILLISLLVTLT
LAGSDVNNYLVGAPVVDCQDTSISITFSTAKPFTGRVYVKGLQEDDRCSRSYAGNSEQRK
FTIMVNQGDCSMQRQRVSGGSLEGMMFSMVIVVSFHGTFETMNDKAFRSVCFFRNIKRVT
NFLDVSMLPTTELMDTGKMPDCSYTIRKDSPTGPVIRYAEVGDRLFHVWECEDDGQGLLV
HSCWVSDGRGSRFELLDIDGCAIDPVIQPDIRYEKSLTRAYVETWAYKYSDTSVLDYQCI
VELCKKSQGECDTMTPPRCVRSKRASANVGNKQLRLHANRQRRHVVHNSDRQFDLLADVR
VMDSLVVDQEFGNVPKSIIDKLNRVNSGVVRNATASDLGDRLCLSAPAVGFLLTLIVALF
IAASTTSLLLFTRRGDADLKNRISLNNKKTDIIPFHIVIATEMQILPILKLSLTKLCCFD
G
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaactattctttatgaaacgacttcaaagatgaatgattttgatatcgattac
cgccgcttcaaaagtaatgaagtactggtaccgaatcggggttccacatatgcagtaaac
gtagcgaatgaaatggaagattcttctgaaaacatttctgccaaatttccgtacatgtat
gatttactgggacttaaatttccattagattccgctgaaaacatagattgctttcaatcg
tttataattagaaacatacagtccacttggaaaaagggatcttcaagtttgaatcgaaga
tttctgaacattatgaccgttgacattctgacgacgaatgtgcgtactcagcgagttgcc
gcgcacagccatgtcaaaggacttggtcttgaaactgacggcagagcaaaacagattggt
agtggatttgttggccaagtcgaagcgcgtactgctgctggtgtaatcgtggacttggtg
aaaatgaaacgaatggccggcagggcagttttgttggctggtccaccaggaactgggaag
actgctattgctttggcaatagcacgtgaactgggaagtaaagtaccgtttgctcccatg
gtagcttcggaagtatattctatggaagtgaagaaaactgaagttttgatggagaacata
cgtcgttgcataggttatgaaacaagattgacaaatttgactgttggattacgaactacg
aaaggttgcacgcaactgaagttagatcccacactgtacgacgttttcttgcagcagcgt
atagaagttggtgacgttatttacattgaaaccaacagcggagcagtgaagagagttggt
cgttgcgatgtgtatgctacggaaacagacttagaagccgaagaatttgtgccacttccc
aaaggcgaaattagaaagcagaaagaatttgttcaagatgttactttgcatgatttggat
acagcaaatgctaagccaagtgtaagcgttaaacaacggaataattgtagtagtattttt
acattaatttatttagaaaatcttagaaaagaagtaaatgcatctgtcaatcgatacatt
gaacaaggcattgctgagttggttccaggtgtgctgttcattgatgaagctcacatgttg
gacatggaatgttttacatatttgcatagagtgattgaatcaagttttagtccaattgtt
attttggctactaatagaggcttttctaaaataagaggaacagaaatagtttcagcacat
ggcattccgcaagatctgctcgagcgattgttgattgttaaaactttaccgtatggtttg
caggaaattttggagattgttaaaatcagagcgaaagcggaaaatgttaatatcactgga
gaagctttgcaaagtttggctgaaattggttatcgagcttcgctgagaatgtggcagcaa
agtttcgtggcatttcggttgttcaattgtgctattattcgtccacgatgttgctgcagt
agtagacaactacgggaaattgaaaatcgcttgttcatggtaaattctgtagaatcggcg
tgtgaaagtgattttcccacggaaaaaattgcaaaagaagattttgagacgaatcggcaa
tttttgcctgcttataattcaaagtacaaaccgagacggtattttcgttcttacactttg
gctccgtttgttaatgattcagaattgttgcgcaattttgtcgaaattggagttgatttg
tcgaaattggaatcccgctcgaatgcggttgattttctcgtcaaactcgattggaaaaac
gatgtacaaccgatgcttcgttttctggtcttgaacggtattccattggaagaaattggc
caatatctaacccgtaatccttggatatttcaacaaaatttacaacatctctcagatagg
atcggatatttgaaatcgaaagcattcaccgttgacgcgattgctcacatcatcaacaag
gccagatattggttgaatttcgatattcaaacaatcgactctcggttaggttggctgcaa
attaatttcaagcttactggcgatgaagtgcgggatgttgttaccaaagagccaaagttg
atcacttttggtaccggatacgtgcagagattgcaattcacatttggacaagaaatgggt
tttacaaaaattcaaacgaaacaattgctaattaaagatccgaaattatacattacttat
agatcagttttgatgaaaagttttgattatttgcacaatgtggttggcttttctcatgag
acaattttaagctggccgcgttgcttacgtgaatcaagttacaaagcaagggcgaggcat
cagtttttgaaacgtttaaaaagagatcaattcgacccacaacgtccgaattatgtcact
gttgaagcgatgctttccggcgatgatggtgagttttgtgcacgagtggccaaatgtccc
gaagcggtactttcaaccgccagtttaattttgcttatttcattgttggtcactttaaca
ctagccggaagtgatgtgaataattatttggtcggtgctccggtggttgattgccaagat
acgtcgatcagcattacattcagtacggcaaaaccgttcaccggtcgtgtttatgtcaaa
gggctgcaagaggatgatcggtgttcacgcagctatgccggcaatagtgaacagcgaaaa
ttcaccatcatggtcaatcagggtgattgtagtatgcaaagacagcgggttagcggtggt
tcgctggaagggatgatgttttcaatggtcattgtggtcagctttcacggcacatttgaa
acaatgaacgacaaagcattccgttcagtttgctttttcagaaacatcaaacgtgtgacc
aattttctggacgtcagcatgcttcccactactgagctgatggacactggcaaaatgccc
gattgttcgtatacgattcgcaaagattcacccactggtccggtgattcgttatgccgaa
gtgggcgatcgtctttttcacgtttgggaatgcgaagacgatggtcaaggtttgctggtc
cactcgtgctgggtgtccgacggtaggggtagtcgatttgaattgcttgacattgatggt
tgtgctattgatccggtcatacagccggacattcgatatgaaaagtcgctaaccagagct
tacgtcgaaacttgggcttacaaatattctgacacgtcggtattggactatcagtgcata
gtggaactttgcaaaaaatcacaaggagaatgcgacacgatgacgccgcctagatgcgtt
cgttccaaacgtgcttctgcaaatgttggcaacaagcagcttcgtttgcatgccaatcgt
cagagacgtcatgtggttcacaattctgacagacagtttgatttgttggctgatgtccgc
gtcatggattcattggttgttgatcaagaatttggaaacgtacccaaatcaatcatcgac
aagctcaaccgtgtcaacagtggcgtcgttcgcaatgcaacggcttcggatctcggcgat
cggctgtgcttaagtgcaccggctgtcggctttttgctcactttgatcgtcgcgttgttc
atagccgcttctacgacaagcctacttttatttacaaggcgtggtgatgctgatttgaaa
aatagaataagtttgaacaataaaaaaacggacattattccgtttcatattgtcattgcc
actgaaatgcaaattctccctattctgaaattgtcacttacaaagctttgttgcttcgat
ggctag
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integrated database retrieval system
