Trichinella spiralis: Tsp_09280
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Entry
Tsp_09280 CDS
T01609
Name
(RefSeq) putative PWWP domain protein
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00270
Cysteine and methionine metabolism
tsp01100
Metabolic pathways
tsp04148
Efferocytosis
Module
tsp_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Tsp_09280
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Tsp_09280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_09280
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_09280
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_09280
Enzymes [BR:
tsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Tsp_09280
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
Tsp_09280
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Tsp_09280
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tsp_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
PWWP
Motif
Other DBs
NCBI-GeneID:
10905077
NCBI-ProteinID:
XP_003375702
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MGFSVCFKRKNVKKVIIFKNQRFVSIVGASCQFELSGRVGRIDEALQSMDKQNGSSKKSQ
KDFNNSNKRNSRIGVCTDPNCTLKIGDIVWARLTTRSVWWPGVVVDPRTCGYDLNESVWV
YWIGDQRISDVLPENTVSIMDNFEGRYRIRGSANYHKSVEEALKLFFEQNGIPLPTNVVT
AALNGFTGKLREDIHYALRRNTHKILPIHIRQRLSEINSQVSLESAQMKTLNHQLPSEYS
TNSPTATTTSSFSEDFLKRCKNWQIVHEAIVIIEKDPWYCFICAMEKLGPLNPQSDWKKR
LSSLFNNENVRDDIDLTLFPNEKQPIRVLSLFDGIATGKIALDELGINIEIYYSCEIDQE
ALLVTKVNHENQIVYLGDVRGITREKLEEISPIDLLIGGSPCNDVSIANPKRRGLYDPEG
TGILFFEYFRILQNLLCINSKLNRNLFWLFENVASMRDCYKTVIDRFLGMSKVRTITTRT
NSLKQGRTFSLCPIEMDGRPDTLWITEIEKLFGLPSHYTDVGGLPPAKRQKLIGQGWTVS
VRVSLIVILAFDDYQCCRKSNIKPFDGISNILSCSTLANCFFDEYKKLYERDLNLIRNCC
YTITFSKSIHTMA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttcagtatgctttaaacgtaagaatgtaaaaaaggtaataatatttaaaaat
caacgtttcgtttctatcgtcggtgccagctgccagtttgaactgtcaggtagggttggc
cgaatcgacgaggcgttgcaaagtatggacaaacagaacggatcgtcaaaaaaatctcag
aaagacttcaacaattcgaacaagcgtaacagcagaatcggggtctgcaccgatccgaac
tgtacgctgaaaatcggtgacattgtttgggcacgtttaacaacgagatcggtttggtgg
cccggcgttgttgtcgaccctcgaacatgtggatatgatttgaacgaatccgtctgggtg
tactggataggtgatcaacgcatatcggatgttctaccagagaacactgtatcgataatg
gacaattttgaaggtcgttatcgaattcgtggttcggccaactatcacaaatcggttgaa
gaagcgttgaagctgtttttcgaacaaaacggcatcccgcttccaacgaatgtcgtcact
gccgccttgaatggctttacaggaaaacttcgtgaggatattcattatgcactgcgcaga
aatactcataagattttgccaattcatatccgtcaacgtctgagcgaaatcaactctcag
gtatctttggaatcagcgcaaatgaaaactctcaaccatcaactgccatcagaatattca
accaactcaccaactgctactacaacctcttcattttctgaggatttcctgaagagatgt
aaaaattggcaaattgttcatgaagcaattgttattattgaaaaggacccctggtattgc
ttcatttgtgctatggaaaagctgggtccgttgaatcctcaatctgattggaaaaaacga
ctctcttcattattcaacaatgaaaatgttcgagatgatatcgatttgacattatttccc
aatgaaaagcagccaatccgcgtattatcattatttgatggaatagctacaggaaaaatt
gcactggatgaacttggcattaatatagaaatttactactcgtgtgaaatcgatcaagaa
gcgttgctagttaccaaagtgaatcatgaaaaccaaatagtttacttgggcgacgttcga
ggaattactcgtgaaaaattagaagaaataagccctattgatctactgatcggcggctcc
ccatgcaacgacgttagcattgctaatccaaaacgacgtggattatatgatcctgaagga
acaggaattctattcttcgaatatttccgcattttacaaaatttactctgcatcaattca
aaattgaatcgcaacttattttggcttttcgaaaatgtagccagcatgcgggactgttac
aaaacagttattgaccgttttctcggaatgtccaaagtacgcactattactactcgaaca
aacagtttaaaacaaggtcgaacattttctttgtgtccaattgaaatggacggtcgtccg
gatacattatggattacagaaatagaaaagctttttggtttaccgtcgcattataccgat
gttggaggtcttccgccggcgaaacgacaaaaactgatcggtcaaggttggaccgtttca
gtgcgtgtaagtctaattgtgattcttgcttttgatgattatcaatgctgtcgtaaatcg
aatattaaacctttcgatggaatttcaaatattctcagctgttcaacacttgctaactgt
ttttttgatgaatataaaaagctctacgaacgcgatttgaatctcattcgaaactgttgc
tatactatcactttttcaaaatcaattcacacaatggcttaa
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