Trichinella spiralis: Tsp_09367
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Entry
Tsp_09367 CDS
T01609
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_09367
Enzymes [BR:
tsp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tsp_09367
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tsp_09367
Prokaryotic type
Tsp_09367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
10905327
NCBI-ProteinID:
XP_003375790
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MSSELKFSCSDAINSGTDFELNNQKRQKLENDEETRKIIKAEPTETVRIKRYKYAMFLAY
RGKNYHGMQVNPNVPTVEKYIMEALQKLNLITVDQVVQPSLFKFQRAARTDKGVSATKQI
CSLLLPTIEGKENDTVNLLNGLQRATKSFDSKKWCDYRSYSYTLPSYCFRHQSDLERDKF
RLDNKDIEEINRILMQYVGTHNFYNFTSGKLHKDESCKRFIIRCECGKRFLYNNIEYLTV
DIKGQSFLIHQIRKMIGFCISLIRGDLDPCLQQKVWQNERIKVPKAPSLGLVLEEVRMPH
YEHYNKRFQATHQRLCWDIYQEKCEEFKQAYIIKDILETDESEKIFEEWLTYLTEKFWNE
NDVDDVSIVGHSDNVQTDGKSNLKEKVELS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaattgaaattcagctgcagcgatgcaataaacagcggcactgattttgaa
ttaaacaatcaaaagcggcaaaagttggagaatgacgaagaaacgaggaaaattataaaa
gcagagccgactgaaactgtgcgaataaaacgttacaaatatgcaatgtttttggcatac
cgaggaaagaattatcacggaatgcaagtaaatcccaatgtacctacagttgaaaaatat
atcatggaagcattgcaaaagttgaatttgatcacggtagatcaggtggtccaaccttcc
ttatttaaatttcaaagagcagctcgtacagataaaggcgtctctgcgaccaagcaaatt
tgttcactgttattaccaacaatagaaggcaaagaaaacgacactgttaatttactgaac
ggtttacaacgtgcaacgaaaagttttgattcaaaaaagtggtgtgactatcgttcatat
tcttatacattaccgtcttattgttttcggcatcaatctgatttggaaagagacaaattt
cgattagacaacaaagacattgaagaaataaatcgaattcttatgcagtatgttggaacg
cataatttttataactttacatctgggaagcttcacaaagacgaaagttgcaaaagattc
ataatacgctgtgaatgcggaaagcgtttcttgtacaataacattgaatatttgacagtt
gatataaaaggccaaagttttttaatacatcagattcgaaaaatgattgggttttgtatt
agtctgattcgtggtgatttggatccgtgtttgcagcaaaaagtttggcaaaatgaaagg
atcaaagttcccaaagccccttctcttggactcgtgctcgaagaggtgagaatgcctcat
tatgaacattacaacaagcgtttccaggcgactcatcagcggctatgttgggatatatat
caggaaaaatgtgaagaatttaaacaggcttatattattaaagatattcttgaaactgat
gaaagtgaaaaaatatttgaagaatggttaacatatttgacagaaaaattttggaatgaa
aatgatgtagacgatgtatcgattgttggtcacagtgataatgtgcaaacagatgggaag
agcaatttgaaagaaaaagttgaactttcctaa
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