KEGG   Trichinella spiralis: Tsp_09421
Entry
Tsp_09421         CDS       T01609                                 
Name
(RefSeq) DNA polymerase epsilon subunit B superfamily
  KO
K02321  DNA polymerase alpha subunit B
Organism
tsp  Trichinella spiralis
Pathway
tsp03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tsp_09421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsp03032]
    Tsp_09421
DNA replication proteins [BR:tsp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    Tsp_09421
SSDB
Motif
Pfam: DNA_pol_E_B Pol_alpha_B_N DUF2192
Other DBs
NCBI-GeneID: 10902580
NCBI-ProteinID: XP_003371156
LinkDB
Position
Unknown
AA seq 586 aa
METVKIEDIAQQFSYLGFMFNSADDVQVCNNILRICSNLKWKAEEFVDQWISFSLSNSMT
EMSVENLNIMERNFLRNRRQEHCGQLSPRKTFLNDSKISEISNTSFEMSKELLSAYISDH
QDDSAIEDVMENSQQIELSSPCAAILKRSSSVKLIFSFQPNVTLEWIVPEMDRNITVQPF
NCKQFLYKSYRYMYEKLEDRMETLGKMIDSIGGAVMRSVGEGKELLPVDSVSDEMIYICG
QVYSFSGLLKSSKDVHLQGKSDHGFSEVTLDLSSVKQYAIFPGQIIVAKGFGLHSHIFAA
DEIYSGELAPIPVKTFDEVVQCNLLFVIACGPFCYTDDNNFTALQELVNYCLQVKASSLI
LIGPFFYNENIKPLSQDDVSYEELLCKMLFNICETLSANFTNVIIVASPKDTFSSQIYPC
PPYRLKWRAFIGENVEQPDNLFFAPDPCLLNVGGVIVGITSTDILWHLKNEELVEGIQQG
ERVNRMITHLLMQRSFYPLCPSGDATVEYSKLKLYGELSVRPDILILPSKFHHFIKSIHK
TVCVNPGNFVKAKSTGTFATMKIFMNQLLQRTDDFENCVLGEILRL
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggaaactgtaaaaattgaagatattgcgcaacagttttcctatcttggatttatgttc
aactctgcagatgatgtacaagtatgcaacaacattttgcgtatttgctctaatcttaaa
tggaaggcggaagaatttgttgatcaatggatttcattttcattgtcaaattctatgaca
gaaatgagtgtggaaaatttaaacataatggagcgcaattttttgagaaacagacgccag
gaacattgtggacagttgagtccaagaaaaacttttctgaatgattcgaaaatctctgaa
atttccaacacatcctttgaaatgtcaaaggaattattatcagcatatatcagtgatcat
caggatgattcagcaatagaggacgtgatggaaaactctcaacagatagaattgtcttca
ccatgtgcagcaattttgaaacgcagtagtagtgtgaaattgattttttcatttcaacca
aatgttacactggaatggattgtgccggaaatggatcgaaatataactgttcaaccattt
aattgtaaacaatttttgtacaagtcttatcgttacatgtatgaaaagctggaggacaga
atggaaacgttgggtaaaatgattgattccattggtggtgcagtgatgagaagtgttggg
gagggaaaggaattattgccagttgatagtgtttctgacgagatgatttatatttgtggt
caagtgtattcatttagtggattattaaagagcagcaaagatgtacatttgcaaggcaag
tcagatcacggattttcagaggtaactcttgatcttagttcagtgaaacaatatgcaatc
tttcctggacaaatcatagttgctaaaggatttggactgcattctcatatttttgcagca
gatgaaatttattctggtgaattggcgccaatacctgtcaaaacttttgatgaagttgta
caatgcaatttattatttgttattgcttgtggaccattttgttataccgatgacaataat
tttacagctttacaggaattagtaaattactgcctgcaagtgaaagcttcaagtttaatt
ttaattggtcccttcttctacaatgaaaatattaaacctctatcccaagatgacgtcagt
tatgaagagctgttgtgtaagatgttattcaacatctgtgaaactttgagtgcaaacttt
acgaatgttattattgttgcttctccaaaggatacattttcgtcacagatttatccatgt
ccaccatatcgtctgaaatggcgtgcattcataggtgaaaatgtggaacagcctgacaat
ctgtttttcgcaccagatccttgtctgttaaatgttggtggtgttattgttggtatcact
tctactgacattttgtggcacttgaaaaatgaagaattagtcgaaggcatccagcaaggg
gaacgagtgaatcgcatgattactcacttgttaatgcagcgtagtttttacccactttgt
ccctctggtgatgcaaccgtagaatatagcaaactgaaactttatggtgaattaagcgtt
cggccagatattcttattttgccttctaaatttcaccatttcatcaaatcgattcacaaa
acggtttgtgtaaatcctgggaattttgtgaaagccaagtcgacaggtacgtttgccaca
atgaaaatttttatgaatcagcttcttcagagaaccgatgatttcgaaaactgcgttttg
ggtgaaattcttcgactataa

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