Trichinella spiralis: Tsp_09503
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Entry
Tsp_09503 CDS
T01609
Name
(RefSeq) putative ATPase, AAA family
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tsp
Trichinella spiralis
Pathway
tsp04137
Mitophagy - animal
tsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tsp_09503
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Tsp_09503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_09503
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_09503
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_09503
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_09503
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tsp_09503
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Tsp_09503
Membrane trafficking [BR:
tsp04131
]
SNARE
SNARE associated proteins
Others
Tsp_09503
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Tsp_09503
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_09503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_33
CDC48_2
AAA_14
AAA_2
RNA_helicase
TIP49
AAA_22
NPHP3_N
AAA_28
Parvo_NS1
Mg_chelatase
ATPase_2
AAA_17
nSTAND3
ABC_tran
IstB_IS21
Vps4_C
AAA_18
Viral_helicase1
NACHT
AAA_25
DUF815
NB-ARC
AAA_7
Rad17
AAA_24
TsaE
Sigma54_activ_2
ResIII
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
10902881
NCBI-ProteinID:
XP_003371300
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MVACVQACNDDFPFFISFKATLQAFCKQCNISSRCFLGGESNKKQADEPENKADLTTAIL
NDKKRPNRLIVDDSSNEDNSVMMLNPIDLWLFESFSKLFYSKMEELLLFRGDTVLIKGKR
RRDTVVVVLADETCPKEKIRLNRLVRGNLRVRVGDVVNIQALPDLKYGTRILVLPIKDTI
VGLQGNLFEVFLKPYFCESYRPVRKGDLFSVTGAMRTVEFKIVETDPSPYCIVAPETMVH
CDGEPIEREEEEERLEDVGYDDIGGCRKQLAQIKEMVELPLRHPQLFKTIGIKPPRGILL
YGPPGCGKTLIARAVANETGAFFFLLNGPEIMSKLAGESESNLRKAFEECEKNAPSILFI
DEIDAITPKREKTHGEVERRIVSQMLTLMDGLKQRSHVIVIAATNRPNSIDPALRRFGRF
DREIDIGIPDAIGRLEVLRIHTKKMRLAEDVDLEQVHNISNETHGYVGADLASLCSEAAL
QQIREKMDLIDLEDEVIDAEVLDSLAVTMDNFRWAMSKTTPSALRETVVETPTITWNDIG
GLESVKKELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIAHECQANFI
SIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSLGDAASMEAVL
GGAADRVINQILTEMDGMTSKKNVFIIGATNRPDIIDPAILRPGRLDQLVYIPLPDEKSR
VQILKAALRKSPLSNDVDLGFLAKMTHGFSGADLTEICQRACKLAIRENIEKEILHEKER
QKRAARGEELMEDDDDPVPELRKDHFEEAMRHARRSVSDVDIRKYEMFAQTLQQQRGFGT
NFRFPQEAGGQRAPGGSNDPLSDDEDLYN
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcctgtgtgcaagcatgcaatgatgattttccttttttcatctcattcaaagca
actttacaggctttttgtaaacagtgtaatatttcatcacgctgctttcttggaggtgaa
tcgaataagaagcaggccgacgagcctgaaaataaagccgacttgaccacagctattttg
aatgataagaagcgtccgaatcgtttaattgttgacgattccagtaatgaagacaattca
gtgatgatgctcaatccgatcgacctttggttgtttgaatcattttcaaaattattttac
agcaaaatggaggagttattactgtttcgcggcgatacggtcttgatcaaagggaaacgt
cgacgagatacagtagtggttgttctggcagatgaaacttgtccgaaggagaagattcgt
ctgaatcgtttagttcgtgggaacttgcgtgttcgcgttggcgacgttgtgaacatccag
gcattgcccgatctgaaatatggaactcgtattcttgttcttccgattaaagataccatc
gttggtcttcaaggaaatttgtttgaagttttcttgaagccttatttctgtgaatcgtat
cgacctgtcagaaagggtgatttgttctctgttacgggagcaatgcgaacggtggaattc
aagattgtggagactgatccttcaccgtactgcattgttgctcccgaaacaatggttcac
tgtgacggggaaccgattgaaagagaggaagaggaggagcgtttagaagacgttggttat
gatgatattgggggctgtcgtaagcagttggctcaaattaaggagatggtggaattacca
ttacgccatcctcagttatttaagaccattggaatcaagcctcctcgtggtattctgtta
tatggtccaccaggatgcggaaagactctgattgctcgtgctgttgcgaacgagacgggc
gctttcttctttttgttgaacggaccggagataatgagtaaattggctggcgagtcggaa
tcaaacttgagaaaagcattcgaagaatgtgagaaaaatgcaccatctattttgtttatt
gacgaaatcgacgctattactccaaagcgagaaaagactcatggtgaagtagaacgtcgt
attgtgtcacagatgttgacgttgatggatggcttgaaacagcgaagccatgtgatagta
attgcagcaacaaatagaccgaacagcatagatccagcattgcgtcgttttggtcgtttc
gatcgcgaaattgatattggtattccagatgccatagggcgtttggaggtgttgcgcatt
catacaaagaaaatgcgtttagctgaagatgtcgatttggaacaggtacacaacatttca
aatgaaactcatggctacgtgggtgctgatttggcatcactttgttctgaagcagccttg
cagcagatccgagaaaaaatggatttaattgatttggaagatgaggttattgatgcagaa
gttttggatagtttagcagtaacaatggataactttcgttgggcaatgtcgaagacaaca
ccatctgccttacgtgagaccgtggttgagactccaacgattacttggaatgatattggc
ggtttggaaagtgtgaaaaaagagttgcaagagttggttcagtatccggttgaacatcca
gaaaagtatttgaagttcggaatgcaaccatctcgtggtgttttgttttacggtccgccc
ggctgtggcaaaacactgttagctaaagcaattgcgcatgaatgccaggccaattttatc
agtattaaaggtccggaattgttgacgatgtggtttggtgaatcagaagcaaatgtgcga
gatgtttttgacaaggcaagagcagctgctccatgtgttttgttttttgatgaattggat
tctattgctaaagctcgtggcggtagtcttggtgatgctgcttctatggaggctgtttta
ggaggggcagctgatcgtgtaatcaatcagattttgacggaaatggacggtatgacgtcg
aagaagaatgttttcatcattggcgctacgaatcgtccagatataatcgatccggctatt
ttacggcctggtcgtcttgatcagttggtttacataccactaccggatgaaaagagtcgc
gtacagattctgaaggcggcattgagaaaatctccattgtctaatgatgtggatttgggt
tttttggcaaaaatgacacatggttttagcggtgcagatttgacggaaatttgtcagcgt
gcctgtaaattggcaattcgtgagaatattgaaaaagaaattctgcacgaaaaagaacgt
cagaagagagcggctcgaggagaagagttgatggaagatgatgatgatccggttccagag
ttgcgaaaagatcactttgaggaagcgatgcgccacgcacgtcgttctgtttcagatgtt
gacatacggaaatatgagatgttcgcacaaactttgcagcagcagagaggttttggaact
aattttagatttccacaagaagcaggtggtcaacgagcgccaggcggaagtaatgaccct
cttagcgatgatgaagatttatacaattga
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integrated database retrieval system
