Trichinella spiralis: Tsp_09511
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Entry
Tsp_09511 CDS
T01609
Name
(RefSeq) glutamate-gated chloride channel subunit beta
KO
K05273
glutamate receptor, anionic
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsp04040
]
Tsp_09511
Ion channels [BR:
tsp04040
]
Ligand-gated channels
Anionic glutamate
Tsp_09511
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
10902873
NCBI-ProteinID:
XP_003371292
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MRTTFPYSIVLFYAYCCCWVFANHYYPIWLAELEEDFARRSDNKTNYRSWREQRLVKNLL
LNYSSNLRPASPHEPVLVMTSIHITGLSAIDEFNMQEWIDKRLTFKDPYFSKDEFIYLSK
DQNVWIPDTFFQNEKRGTYHTLDQPNFYVKIRADGTVVYNRRLTMTFACAMQLEKYPMDE
QTCNMDFSSCKFQLECACNAYTDADVDYAWSLNPLKISPWAESELSNFIITSFKNASCTS
KTATGTYTCLRVELHLRRLFSFFLLQLYIPSSLLVAVSWVSYWIDWRAAAGRVPLSIITL
LTMITHSYAINAKLPPVSYAKALDVWIGACIMFIFGSLIEYAFVNYAGLREQFKIAEIKA
NESQIESANFSTDQYDRPIYANQDELYESYPRRRKRSSLSKQSEEIGLSPSMDFKEEKDT
SVLELVDMTNNERQKRRRNQLSGRSN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagaactacttttccatattctatagtactgttttatgcatattgttgttgctgggtt
tttgctaatcactactacccaatttggttggctgaattagaagaagattttgcaagacga
tctgacaataagacaaactatcgttcgtggagggaacaacgactggtgaaaaatcttcta
ttaaattattcatcaaatttacgaccagcaagtccccacgagccggtattagttatgaca
agtattcacatcactggattaagtgcaatagacgaattcaacatgcaagaatggatagat
aaacgattgacattcaaagatccctatttttcgaaagatgaattcatctatttatccaaa
gatcaaaatgtctggattccggatacattttttcaaaatgaaaagcgcggcacttatcat
actttggatcagccaaatttttatgtaaaaatacgcgctgacggcacggtggtatacaac
aggaggctaacgatgacgttcgcctgcgctatgcaacttgaaaaatatcccatggatgaa
caaacgtgtaacatggatttctcgagctgtaagttccaactggagtgtgcatgcaatgct
tatacggacgctgatgtggattatgcttggagtttgaatcctttaaaaatttccccgtgg
gcggaaagtgaattatcaaattttattattacatcattcaagaatgcgtcatgcacaagc
aaaactgccactgggacatacacttgccttcgagtggagcttcatttgagaagattgttt
tcattttttcttcttcaattgtacataccttctagcttgcttgtagcagtttcgtgggta
tcttattggattgattggagagcagctgcaggcagagtgccgctttccatcataacattg
ttgacaatgattacgcatagttatgcaataaatgctaaattaccaccagtgtcttatgcc
aaagctttggacgtttggattggtgcatgcataatgttcatattcggttcattaatagaa
tatgcgtttgttaattacgctggcttacgcgaacaattcaaaattgcagaaatcaaagca
aacgaaagccaaatagaatcggccaatttttcaacagatcagtatgacagaccaatctat
gcaaatcaagatgaactttacgaaagttatccgagaagaagaaaacgatcatcattatcg
aaacagagtgaagaaatcggattatcaccatcgatggattttaaagaagaaaaagataca
tctgtcttggaattagtcgacatgaccaataatgaacggcagaaacgaagacggaatcag
ctctcgggcagatcaaattga
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