Trichinella spiralis: Tsp_09528
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Entry
Tsp_09528 CDS
T01609
Name
(RefSeq) nuclear hormone receptor family member nhr-23
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_09528
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tsp03310
]
Tsp_09528
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
Tsp_09528
Nuclear receptors [BR:
tsp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
Tsp_09528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
10902897
NCBI-ProteinID:
XP_003371316
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MDNIMKHTFHYTVHCFKNVKINQRNECDNNNNGTNNNKTIIFEKENSSKTKNRRKYLSRN
LYFTQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNYQCPRSKSCVVDRVNR
NRCQYCRLKKCLELGMSRDAVKFGRMSKKQREKVEDEVRMHKQLQEQLPMNVSGGMVAMN
GSQSMYGQYSSPNAPYSPTAFYSSYATNGSAYLGNGYSGYHQSIPAVSSYQTNHVVNASP
YTTNNLSPYVGTSGSGEQLTMQSSSSRVKIESPNDSLSNFSGNSASAVLVSDVLTTIKTL
TTAHAHTCIYSVEQRQQLKLNSVEQNQALIMKYKSMTRLDRWLDCANKLTHAVQQIIEFA
KLVPGFMKLQQDDQIMLLKGEDAAEQQFIVNVFNLVRELAACFLTESEIALYSALVLMSP
GRNGIRNQTSIREMHELFFDCLAHEIRNNHPNDLTLMPRLTSYLTTLQEVASQHVAVLAK
FKKVSMVELPALYKELFSVDG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggacaatataatgaagcatacgttccattacacagttcattgtttcaaaaatgttaaa
attaatcaacgtaatgaatgcgacaacaataataacggcaccaacaataataaaactatt
atttttgaaaaagagaattcgtcgaagacgaaaaatcgtcgaaaatatctttcccgcaat
ctttatttcactcaaattgaaattatcccatgcaaagtttgcggcgataagtcatctgga
gtgcactacggtgtcatcacttgtgaagggtgcaaaggcttttttcgtcgaagccaatcg
tcggtgacgaactatcagtgtccacgaagcaaaagttgcgttgtcgaccgtgtcaaccgt
aatcgctgtcagtattgtcgattgaaaaaatgccttgaattgggcatgtctcgcgatgca
gtgaagtttgggcgaatgtctaagaaacagcgtgagaaagttgaagacgaagtccgcatg
cataagcagttgcaagaacaattgccaatgaatgttagtgggggaatggttgcaatgaat
ggatcccagagcatgtacggacagtacagttctccgaacgctccgtattctcctacagca
ttttattcatcctatgcaacgaatggctctgcatatcttggaaatggatatagtgggtac
catcagtccattcctgcagtgagcagttatcaaacaaatcatgttgttaacgcctcacca
tatacgaccaacaacttgtctccttatgtcggtaccagtggcagtggagaacagttgacg
atgcaatcgtccagctctagggtgaaaattgagtcacccaatgattcgctaagcaatttt
tcaggaaattcagcttccgctgttcttgtgtcggatgtgttgacaacaatcaaaactttg
accactgcacatgcacatacttgtatttattctgtggagcaaagacaacagctgaaattg
aacagtgtggaacagaatcaggctctgattatgaagtataaaagcatgactcgtttggat
cgttggttggactgcgccaacaaactgactcatgcagtgcagcaaattatcgagtttgct
aaactggtacccggatttatgaagctgcaacaggatgatcaaataatgttattgaaagga
gaagatgctgctgagcaacaatttattgtgaacgtcttcaatttggtgcgtgagttagca
gcgtgttttttgacagagagtgaaatcgctctctacagcgcgctggtattgatgtctccg
ggtcgaaacgggattagaaatcaaaccagcattcgtgaaatgcacgaactattttttgac
tgtttggcacatgaaattcgcaacaatcatccaaatgatttgacgctcatgccacgattg
acctcatatctgacgactttgcaagaagttgcttctcagcacgttgctgtattggcgaaa
tttaaaaaggtttcaatggtggagttgcccgctctttacaaggaattgttttcagttgat
ggatga
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