Trichinella spiralis: Tsp_09579
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Entry
Tsp_09579 CDS
T01609
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
tsp
Trichinella spiralis
Pathway
tsp03430
Mismatch repair
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tsp_09579
03460 Fanconi anemia pathway
Tsp_09579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_09579
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
Tsp_09579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
10902911
NCBI-ProteinID:
XP_003371330
UniProt:
E5SR86
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MNSTRPIKPLKKCVIDRIAAGEVILSPMNVVKELMENSVDAGANQINISISGGGLKLIRI
QDNGCGIRRDDFPVVCQRHATSKLEDFTDLLNISTLGFRGEALSSICCVAHVTVTSKTLD
SVVGYECRFNGEKMTEPPKALASNQGTVISVENLFYNNPVRQRLMKNSVEEWNRIVDLVA
KFAIHFTSIGFSLKREDRNISELKTTTQGSTNEKLATCFGSSVAKELIAFDCTEPKLGFK
AKGLISSTSYSSKKFTLCLFINNRLVECLALKRGFQALYSNYLPKQCYPFIYISMEISPH
LVDVNLHPTKAEISFMNESDIVENILQAADKTLLAGDKSRSFLAVKTVRPRRSANCDSFL
STSLSTSVQDCHIVRVDCNDRKLDEFLDTSSTLSSEQIILTFPDSVVNLNSEAVEQSTEK
KDKINSTSLALEKSKAVTKRVLNLTSVLELQQQICENSSVEMRNLFRTHTFVGCINPKLT
LMQCSTSLYMIDMEVISEELFYQILIMRFGNLDSFRMTEPVSIRNLLNIAIQVQKASRTE
SSPSNGISQQNVDLEKAVQLFNAKAQMLWDYFALEIKDDYLISLPMLVKNYLPQIEGLPH
YLMNLLCNVNWFHEKECFDTFARQTAKFYSLKATYCSDELISPLIQPVSWKWTIENVLCR
ALKAKFLPPTQLVTDRKIFKLTDLPELYKIFEPRNDKLQTEPFIFYDKFSNCII
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaattctactcgtccaattaaacctttgaaaaaatgtgtgatcgaccgtattgcagca
ggagaagtaattttgtctcctatgaatgttgtgaaagagcttatggagaacagcgtcgat
gccggcgctaatcaaataaacatttcaatttctggtggtggtctgaagttaattcgaatt
caggacaacggttgcggaatccgtcgtgatgattttcccgtggtttgtcaacgtcatgct
acaagtaaacttgaagattttacagatttgttgaatatttcaacactgggattccgtggt
gaagcgttgtcgtctatatgttgcgttgctcacgttactgttacgtcgaaaacactggat
tctgttgttggttatgaatgtagatttaatggtgaaaaaatgactgaaccaccgaaagct
ttagccagtaatcaaggaactgtaatttcggttgaaaatttattttacaataatccagtt
cgacagagattgatgaaaaattctgtcgaagaatggaatagaattgtggatttggttgca
aaatttgccattcattttacgtcgattggttttagtttgaagcgcgaagacagaaacatc
agcgaattgaagacaacaacacaaggtagtactaacgaaaagttggcaacatgttttgga
tcatcagttgccaaagagctcattgcttttgattgcactgaaccgaaattaggctttaaa
gctaagggtctaatttcgagcactagctattcttcgaaaaagttcacattgtgcttgttt
atcaacaaccggctggtagaatgtttagcattgaagagagggtttcaggcactttattcg
aattacctgccaaagcagtgttatccatttatttacatatcaatggaaatttctccacat
ttagtagatgtcaatttacatcctaccaaagctgaaattagctttatgaatgaatctgat
attgtggaaaatatattgcaagcagccgataaaacgttgttagctggagataagtcacgt
agttttcttgccgtgaaaacagtacgaccaaggagaagtgcaaattgtgattcatttttg
tctacctcactttcaacttctgttcaagattgtcatattgtccgtgtggattgtaatgat
cgtaaattagatgagtttttggacacttccagcacattatcatctgaacaaattatttta
acgtttcctgattctgttgtcaatttgaattctgaagcagttgagcaatccacagaaaaa
aaagataaaataaatagcacttcgctcgcgcttgagaagtccaaagctgtgactaagcgt
gtgctgaatcttacatctgttttggagttgcagcaacaaatttgtgaaaacagttcagta
gaaatgagaaatctttttcgtacgcacacgtttgtcggttgcataaatccaaaacttaca
ctcatgcaatgttcaacaagtttgtacatgattgatatggaagtgattagtgaggaactg
ttttatcaaattttaataatgcgatttggtaatcttgattcgtttcgtatgaccgaacca
gtttctattcgaaatttattaaatattgcaattcaagttcagaaagcttctcggactgaa
tcttcaccatcaaatggcatttcgcagcagaacgttgatctggaaaaggctgtacagttg
ttcaatgcaaaagcgcaaatgttgtgggattactttgcgttggaaatcaaagacgattat
ttaatatcgttgccgatgcttgttaaaaattatttgccacaaatagaaggtttgccacat
tatttgatgaatttgctttgcaatgtgaattggtttcatgaaaaggaatgctttgacacg
tttgccagacagactgctaaattttattcgttaaaagcaacttactgttcagatgaactt
atatctccgttgatacagccggtttcgtggaaatggaccatagaaaatgtgctatgcaga
gcactgaaggcgaaatttttaccgcctacacaattggtcaccgatagaaaaatttttaaa
cttacagatcttcctgaactgtataaaatattcgaacctagaaacgataaattacaaacg
gaaccttttattttttatgataaattttcaaactgtattatatga
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