KEGG   Trichinella spiralis: Tsp_09652
Entry
Tsp_09652         CDS       T01609                                 
Name
(RefSeq) putative LSM domain protein
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
tsp  Trichinella spiralis
Pathway
tsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tsp_09652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsp03041]
    Tsp_09652
   03032 DNA replication proteins [BR:tsp03032]
    Tsp_09652
Spliceosome [BR:tsp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Tsp_09652
  U2 snRNP components
    Tsp_09652
 Complex B
  U1 snRNP components
    Tsp_09652
  U4/U6.U5 tri-snRNP components
    Tsp_09652
 Complex C
  U2 snRNP components
    Tsp_09652
DNA replication proteins [BR:tsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Tsp_09652
SSDB
Motif
Pfam: LSM EBNA2_Core S1_TP0910 C5orf34_C Gemin7 DarA_N Hfq
Other DBs
NCBI-GeneID: 10898204
NCBI-ProteinID: XP_003374306
UniProt: A0ABR3KAC6
LinkDB
Position
Unknown
AA seq 120 aa
MKLVRFLMKLSHETVTIELKNGTILHGTISGVDVAMNTHLRAVKMTLKDGQTVQLDVLSV
RGNNIRYFILPETIPLDQYLVDDLPKPKRKPTTGGATRARGRGRGRGRGFRGRGTGRSRI
NT seq 363 nt   +upstreamnt  +downstreamnt
atgaagttggtacgttttttgatgaagctcagccatgaaacagttacaatagaattaaaa
aatggtacaattttacatgggaccataagcggcgtcgacgttgccatgaatacccattta
cgagctgtgaaaatgacgctgaaagatggtcagacggtgcagttggacgttctcagcgtt
cgcgggaacaacataagatatttcattctaccagagacaatacctttggaccaatatcta
gtggacgatttgccgaagccgaaaagaaagccaactacaggcggtgcaacgcgcgcccgt
gggcgtgggcgtggaagaggtcggggttttcgtggacgtggaactggccgaagtcgaatt
tga

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