Trichinella spiralis: Tsp_09697
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Entry
Tsp_09697 CDS
T01609
Name
(RefSeq) DNA repair protein Rhp54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tsp
Trichinella spiralis
Pathway
tsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tsp_09697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_09697
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
Tsp_09697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HDA2-3
Stc1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
10898248
NCBI-ProteinID:
XP_003374350
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MQMKLYERFLNSKTMASQLRDACTGNMPSKALALITNLKKLCNHPALIYEKCIEKTDGFE
NCSDLFPPGFSVKKQIRPEWSGKMRVLDGLLAYVKANTDDKVVLVSNYTQTLDLFEQLCI
LRNYGFVRLDGSMTKKKRAKIVADFNDPQVGNSTFVFMLSSKAGGCGLNLIGANRLVMFD
PDWNPANDGQAMARVWRDGQKKICFIYRLLATGSIEEKIFQRQTHKKALSSCVVDNEENL
ASLFSSDQLKDLFRMKSDTISDTHDSLKCKRCIGGVESISPPEDADTNSDLALWHHSKDK
RRIPDNAIKAIWESGLMTFCFYQKSHDA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgaaactatatgaacgatttttgaattcgaaaacaatggcatcccaacttcgg
gatgcgtgcactggaaatatgccatcaaaagcgctggcattgatcaccaatctgaagaaa
ttgtgcaatcatcctgctctgatatatgaaaagtgtattgaaaagacggacggatttgaa
aattgttcagatctttttccgcccggcttttcggtgaagaaacaaattcgaccagaatgg
tcaggcaaaatgcgtgtacttgacggactgctggcttacgtgaaagcgaacactgatgac
aaagttgtactggtcagcaattatacgcaaactttggatctgttcgaacagttgtgcatt
ttgagaaattatggatttgtgcgtttggacggttcgatgactaaaaagaaaagagctaaa
atagtggccgatttcaacgatcctcaagttggcaattccaccttcgtattcatgttgtca
agcaaagcgggtgggtgtggtttgaatttaatcggcgccaatcggctggtgatgttcgac
ccggactggaaccctgccaacgatggtcaagcaatggcgcgtgtttggcgtgatggacag
aagaaaatttgtttcatttatcgtttgttagctactggatcaattgaggaaaaaatattt
caacgtcaaacgcacaaaaaagcgctcagctcttgtgttgtggataatgaggaaaatttg
gcgagcctcttcagctctgatcaattgaaagatttgtttcgcatgaagtcggatacaatt
tctgatacacacgactcattgaaatgcaagcgttgtattggtggagttgaatcaatttcc
cctccagaagatgcggacacaaattcagacctggcattgtggcatcatagcaaagataaa
cgtcgcattccggacaatgcgatcaaagctatatgggaaagtggtttgatgacattttgc
ttttatcaaaaatcacacgatgcgtga
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