Trichinella spiralis: Tsp_09790
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Entry
Tsp_09790 CDS
T01609
Name
(RefSeq) carboxy- domain RNA polymerase II polypeptide A small phosphatase 1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_09790
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_09790
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
Tsp_09790
Protein phosphatases and associated proteins [BR:
tsp01009
]
HAD phosphatases
Fcp/Scp phosphatases
Tsp_09790
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
Tsp_09790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
10898409
NCBI-ProteinID:
XP_003374429
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MHIFFCFAGLEKNRCEVVERKLRVPKVFRGLFCCFGLKPVESAAPLQSEFQNSHFTSRHS
ENNVHASSSERLLLPPVHPSDVNKKCLIVDLDETLVHSSFKPVKNPDFVIPVEIDGVVHQ
VYVLKRPYVDEFLQQISANFECILFTASLAKYADPVADLLDRWGVFRSRLFREACVFHKG
NYVKDLNRLGRDLKHVLIVDNSPASYAFHPDNAVPVQSWFDDLHDTELLDLLPLLDKLAT
ADNVYTVLKGSNRRSTSPVLYHYSECNGVYDPLGVIAQVEQKPL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcatatttttttttgtttcgctggtttagagaaaaatcgttgcgaagtggtggaaagg
aagttgcgggtaccgaaggtgtttcgtggattgttctgctgtttcggcttgaagccggtc
gaaagcgccgccccgttgcagtcggaatttcaaaacagccacttcacgtccaggcattcc
gaaaataatgtgcacgcgtcgtcgtccgagaggctgctattgcctccagtgcatcccagt
gacgtgaacaaaaagtgtcttattgttgatcttgacgaaacgctcgttcacagttctttc
aagcctgtgaagaatccagattttgtaattcctgttgaaattgacggtgtcgttcatcag
gtatacgttctcaaacgtccgtacgttgacgagtttttgcagcagattagcgccaatttt
gagtgcattctttttactgctagtctggcaaagtacgcggatccggttgcagacttgctg
gaccggtggggtgtgttccggtctcgactgtttcgtgaagcgtgcgtgtttcacaaaggc
aattatgtaaaagacttgaatcggctggggcgcgatttgaagcacgtgctcattgtggac
aattcacctgcatcgtatgcctttcatccggacaatgctgttcctgtgcagtcttggttc
gatgatttgcatgacacagagttgttggatttgcttcctttgttggacaaactggccact
gcggacaacgtctatacagtattgaaggggtcgaaccgtcgttccacgtctccagtgctt
tatcactattcagagtgcaacggtgtttatgatccgctcggtgtgattgcgcaggtcgaa
caaaagccattataa
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