Trichinella spiralis: Tsp_09825
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Entry
Tsp_09825 CDS
T01609
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_09825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_09825
Membrane trafficking [BR:
tsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
Tsp_09825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
10907761
NCBI-ProteinID:
XP_003370611
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MNKLWVRMQHQGQSRDREQREKERREIQVLVGTNLVRLAQLETIDVDMYKKYILPKILEQ
VVCCRDAIAQEYLMECLIDVFPDEFHVRCLNIFLKTCADIHQMVNIRNVLVTLIERLSSL
GVTEEGRIIQEDANLFDVLSDEIASIVQSRVDMPTESVVALQVSMMDFALKCYQKRCDYA
DKVLQVTCSLLQCKSQQKFAYNSPVGKELVKLLRLPVDFYSNAMRLLLLKNYPLVLSLLD
HRGRIRCSCQIVYSMLEQRTFVKTAEQAEMLLNLLQTLLKDEPDQPKNYEITEEFVEEQI
LISRLIHLFSADSLDVQYDWNNIMQDDEWENKVEKLIKLIHQLLSLLMSQTRAAHLPIRL
YLQGALLINSVPMEKSSLQAYEFIAQAFAIYEEEISVSKEKLAAIILIAGTLQRMTCFGE
DDHERLRDQCRLAASKLISKSSQCRAVATCAHLFWSSRIADRDQPMHDGEQVVNCLKKCL
QIASQCMDPCAQIVTRQLNELIAKIRETLLQLEPSSDSEQIQKHFNNSIEHLREKAVAAK
VSGSIAFAELVL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctctgggttcgcatgcagcatcaaggccagagccgtgatcgagaacagcgt
gagaaggagcgtcgtgaaattcaagttttggtaggaaccaatttggttcgattggctcag
ttggaaaccattgacgttgacatgtataaaaaatatattctgccgaaaattttggaacaa
gtggtttgctgtagagatgcgattgctcaagaatatttaatggaatgcttgatcgatgta
tttcctgatgaatttcacgttcgttgtttgaatatatttctgaaaacatgtgctgatatt
catcagatggtcaatattcgaaatgttttagtcactctaatagaaagattaagttcgctt
ggcgttacagaagaaggtagaattattcaagaagatgcaaatttatttgacgtcctttcc
gatgaaattgccagtattgtacagtcgcgcgttgacatgccaactgaaagtgtggtcgct
ttgcaagtatcgatgatggatttcgcgttgaaatgttatcagaagcgttgcgattatgcg
gataaagttttgcaagttacttgttcacttttacaatgcaaatctcagcaaaaatttgca
tacaattctcctgtcgggaaagagttggttaagcttttgcgacttccggttgatttttac
agcaacgccatgcggttgttgctgttgaaaaattatccactggtgttgtcgttgttggat
catcgtggcaggatcaggtgctcttgtcagatcgtttacagcatgcttgaacagcgtaca
tttgtgaaaacggccgaacaggcggaaatgttgttaaacttacttcaaacgctgctcaaa
gacgaacctgaccaaccgaagaattatgaaattacggaagaatttgttgaagaacaaatt
ttgatctctcgactgattcatctattttccgctgactcgctcgacgtacagtatgattgg
aataatataatgcaggacgatgagtgggaaaataaggtggaaaagttgatcaaattaatt
catcaattgttgtctttgttgatgagtcagacccgagcggctcatttgcctatacgcctg
tatctgcaaggagcattgttgatcaattctgtaccgatggaaaagagttcattgcaagca
tatgaatttattgctcaggcgtttgcaatttatgaagaagagatcagcgtgagcaaagaa
aaattggctgctattattttgattgccggaacgttgcaaaggatgacttgctttggtgaa
gatgatcacgaacgtttgcgggatcagtgtcgtttggcggccagcaaattgatcagcaaa
tcgtctcaatgtcgggcggtggctacttgtgctcatttgttttggtcgagtagaattgcg
gatcgtgaccaaccaatgcacgacggtgagcaagttgtgaattgtttgaaaaaatgtttg
caaattgctagtcagtgtatggatccctgtgcccagatagttacacgtcaactgaacgaa
ctgattgcgaaaatacgtgaaacgttgttgcagttggaaccgtccagcgattcggaacaa
atacagaaacatttcaataattcaatagaacatttgcgtgaaaaagcggttgcagctaaa
gtttctggatcgatcgcatttgctgaattggttttataa
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integrated database retrieval system
