Trichinella spiralis: Tsp_09860
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Entry
Tsp_09860 CDS
T01609
Name
(RefSeq) putative ABC transporter, ATP-binding protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_09860
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Tsp_09860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
Fer4_6
AAA_22
AAA_16
NACHT
AAA
Rad17
RsgA_GTPase
ORC-CDC6-like
AAA_15
nSTAND3
VapE-like_dom
AAA_29
Fer4_21
Fer4_2
nSTAND_NTPase5
LdpA_Fe-S-bd
Fer4_9
Fer4_7
AAA_28
Fer4_4
Fer4_10
AAA_5
TsaE
SRP54
Fer4_16
NPHP3_N
AAA_30
AAA_23
Fer4_3
AAA_19
AAA_13
Motif
Other DBs
NCBI-GeneID:
10907877
NCBI-ProteinID:
XP_003370646
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSKLPKPGHTEQSKITRIAIVNNDRCKPKNCGQVCKKSCPVVRMGKLCIEVTPSSKIAFI
SESLCIGCGICVKKCPYDAISIINLPSNLEKHTTHRYGPNSFKLHRLPTPRPGEILGLVG
TNGIGKSTALKILSGKLKPNLGKYKEPPEWQEILTYFRGSELQNYFTKLLEDNLRAVIKP
QYVDQIPQAAKGLVSDMIAKKDDLKKADAMCRLLDLENVMDRNVADLSGGELQRFAIAVV
CIQRADIYMFDEPSSYLDVKQRLKAAVAVRSLVHSDNFSIVVEHDLSVLDYLSDFICVLY
GVPGAYGVVTMPFSVREGINIFLDGFVPTENLRFRETSLSFKYPSMKKSLGRRVSQYLSL
ILTKFNLGSFELTVEAGNFSDSEIIVLLGENGTGKTTMIRMLAGRLEPDVNAGEIPQLNI
SYKPQKISPKSNCKVSELLRSKIPDTFVHPQFVAEVLKPLNIEDILDQDVQNLSGGELQR
VALVLCLGKSADVYLIDEPSAYLDSEQRLHAAKVIKRHILNAKKTAFIVEHDFIMATYLA
DRVIVFEGEPSKHALATCPQSLLKGMNRFLERLDITFRRDPNNYRPRINKLNSVKDTEQK
RSGNYFFLED
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattaccgaaacccggtcacacggagcagagtaaaattactcgaatagcaata
gtgaacaatgatcgatgtaaaccaaaaaactgtggtcaagtttgtaaaaaatcttgccct
gtggtgcgaatgggaaaattgtgtattgaagtaactccgtcgagcaaaatagcttttata
tccgaatctctttgtattggttgtggtatatgcgtgaagaaatgtccttatgacgcaatt
agtataattaatttgccgagcaatttggaaaagcacacgactcatcgatacggtccaaac
agttttaagctgcatcgattgccgacgccgaggccaggtgaaattcttggtcttgtaggt
acaaatggtattggaaaatcaacggcgttgaagattctttcgggaaaattgaaaccaaat
cttggaaaatataaagaaccaccagaatggcaagaaattttgacgtattttcgtggatct
gagctacagaattactttacgaaattattggaagacaatcttcgggcagtaataaaacca
cagtatgttgatcaaattcctcaagctgcaaaaggacttgtcagtgatatgatagcgaag
aaggatgatttgaaaaaagctgatgcaatgtgcagattattagatttggagaatgttatg
gatagaaatgtcgcagatttatccggcggagagctgcagcgttttgccattgctgttgtt
tgtattcaacgtgcagacatatacatgtttgatgaaccatcgagttatttggatgtgaag
cagcgtttgaaagctgcagtggcggtgcgctctctggtgcattctgataatttttccatt
gttgttgaacacgatttgtcagttctcgattatttgtcagattttatctgtgttctttat
ggtgtacctggcgcttatggagttgtgacaatgccattttctgtacgagaaggaatcaat
atatttttagatggctttgttccaacagaaaatttacgatttcgagaaacatcattaagt
tttaaatatccatctatgaagaaatctttgggtaggcgagtttctcagtatctcagtttg
attttaacgaaattcaatttaggtagttttgaattgaccgttgaagcaggcaacttttcg
gattcagaaattattgttctattgggtgagaatggtactggaaaaacgaccatgattcga
atgcttgctggaagattggagccagacgtgaatgcgggtgaaataccacaattgaacatt
tcatacaagcctcaaaagatcagcccgaagtcgaattgtaaagtttcagagttgttgcgt
tcgaaaattccagatacgtttgtgcatccccagtttgttgctgaagtgttgaaaccgtta
aatattgaagatatattggatcaagacgtgcaaaatttatctggtggcgaattgcagcgt
gttgcattggtgttgtgcttgggaaagtcggcagatgtgtatctcattgatgaaccgtcg
gcataccttgattctgagcaacgtttgcatgctgctaaagtgatcaagaggcatattttg
aacgcgaagaagacggcatttattgttgaacacgactttatcatggcaacatatcttgcc
gatcgtgttattgtttttgaaggagaaccttcaaaacatgccttagctacatgtccacag
agtttgcttaaaggaatgaatcgatttttggagcggttggacatcacttttcgaagagat
ccgaacaattaccgtcctcgcatcaataagttgaattctgttaaagatactgaacagaag
agatctggaaattatttctttttggaagattaa
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integrated database retrieval system
