KEGG   Trichinella spiralis: Tsp_09890
Entry
Tsp_09890         CDS       T01609                                 
Name
(RefSeq) dihydrouridine synthase (Dus) superfamily
  KO
K05545  tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tsp03016]
    Tsp_09890
Enzymes [BR:tsp01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.90  tRNA-dihydrouridine20a/20b synthase [NAD(P)+]
     Tsp_09890
Transfer RNA biogenesis [BR:tsp03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    Tsp_09890
SSDB
Motif
Pfam: Dus His_biosynth DUF561 ThiG TMP-TENI
Other DBs
NCBI-GeneID: 10907907
NCBI-ProteinID: XP_003370676
LinkDB
Position
Unknown
AA seq 787 aa
MLKHYRGYTIWLLLIISRDTMTNDRTKINIAELFSNSAPLKISAPMVPDNCDDFVKAAEI
VYTQCDGVDLNCGCPKRKTLDANCGSALLDNASHLAELIKQSRLRILDSKFSISVKIRIY
ENLKDTVDLCQKLQSAGITFINVHGRTVEQRHEPVDVEVFKVIKDSLQIPVVANGDVRSL
SDVHYYHQHAGVEGVMVARALLENPALFTGADKTPADCFFHWVSMNVQMEKNQTYDFCQA
DNVPFTRFHRHISFMLEKSLNKSQRAELAEIRDSNQLFTFVSKTVALALLNFGVPLSIPR
KLLSVHLFQDCNIISIFLQPNFLQPSIDMACVGVLSNCFFTSSSLILLISISSNVVETVK
ISGRWHHGSGDPLLTLLAGFGFQKTDPADLEATRGFIFGNITDGMAKPAGYLILIASDWI
EEMKTVYRSDNASCKQLMSRLSDLAFERRCFPKNGQDFFRSIPCPVGNICPDEDDRTNVI
SGYQLTFRIQDVIQARFWYLALVNCILDDACNWVPFNSTIVFRGTTGHVGIVPFRLLYLH
RPLWGAFVFDQLGQIQKPSFFGGDAFARRLASVVLQCALWALHCHSCRRCVDCTAAARRR
FAFLPCRRAVRVVARPFRHVVAQILSTFSCQKEIDHHLRSTGSDCPTDTDHLCYDVSSGT
VAKSFCRNMARMVDPCAEVAADEMVPHGTAHIIAEVEVSTSLRFRLHGVVHLPGGVGCAR
GRIFCFVALQSICFFANFVAYAAMVHLFWPQSVLQKLLCSNDDFDSSKDSADWDEYEQAI
IISSSDR
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgcttaaacattatcgcggctatacgatttggctgcttctgataatttcacgtgacaca
atgacaaatgaccgaacgaaaattaatatagcagaattattttcaaattctgctccacta
aaaatatctgccccaatggttcctgataactgcgacgattttgtgaaagctgccgaaatt
gtttacacgcaatgcgatggtgtagatttgaattgtggttgtccaaagagaaaaactctg
gatgcaaattgtggtagcgcattgttggacaatgcatctcatttggctgaactgataaag
caaagtcgtcttcgaattttggattcaaaattttcaatttctgtcaaaatccgtatttat
gaaaacttaaaagatactgtagatttgtgccaaaaacttcaatctgctggtataacattt
atcaacgtgcacgggcgtactgtggaacagcgtcacgaaccagtagacgtggaagtcttc
aaagtgatcaaagatagcttacaaatacctgtagttgctaacggcgatgtgcgttcttta
tcagacgttcactattatcatcagcatgctggagtggaaggagtgatggtagctagggca
ttgttggagaatccggcattgtttactggagctgataaaacacccgctgattgcttcttt
cattgggtgagtatgaatgttcaaatggagaaaaatcaaacatacgatttctgtcaagcg
gataatgtcccgtttactagatttcatcggcatatttcgttcatgcttgaaaagtcgttg
aataaaagccaaagggcggaactggctgaaatcagagattcaaatcaattatttactttt
gtcagcaaaacagtcgcactggctttgttgaactttggagttccattgtcaataccgaga
aaattgctttctgttcacttatttcaagattgtaatataatttctatttttttgcaacca
aattttttgcagccgtcgatcgacatggcttgtgttggtgtgttgagtaattgttttttc
acatcgtcgtcgttgatattgttgatcagcatcagcagcaacgtggtggagacggtgaaa
atatccggtcgatggcatcacggcagtggcgatccgttgctaactttgttggcaggattt
ggatttcaaaaaacagatccagccgatttggaagctactcggggctttattttcggtaat
ataaccgatggaatggccaaaccggccggctatttgatattgatcgcatcggattggatt
gaagagatgaaaacagtatacagatccgacaatgccagttgtaagcagttgatgtcccgc
ttgagtgacctggcgtttgaacgtagatgctttccaaaaaatggtcaggatttttttcgt
tccattccatgcccggttggcaatatttgtccagatgaagatgatcgcacgaacgtaatt
tccggctatcagttgacatttcgaattcaagatgtaattcaagccaggttttggtatttg
gctttggtgaattgtattttggacgacgcttgcaactgggtccccttcaacagcacaatt
gttttccgtggaacaacaggacacgttggaattgtaccttttcgcctgttgtatcttcat
cggcctctttggggcgcatttgtattcgatcagctcgggcagattcagaagccatcgttc
ttcggtggcgatgcttttgctcgtcggcttgcaagtgttgtattacagtgtgcgttgtgg
gcattgcattgccatagttgtcggcggtgtgtcgattgtaccgctgctgcacgtcggcga
tttgcttttctcccttgccgacgtgctgttcgcgttgttgctcgtccatttcgccacgtc
gtggcccaaatcctttcaacattttcctgccaaaaggaaattgaccaccatcttcggtcc
actggctctgactgcccaactgacactgaccatctgtgctacgatgtctcgagtggaact
gttgccaaatcattttgtcgaaacatggcccggatggttgatccttgcgctgaggttgct
gctgatgaaatggttcctcacggaactgcgcatatcattgcagaggtcgaagtttctact
tcacttcggttccggctacatggtgtggttcatttacctggtggcgttgggtgcgctcgt
gggcgaattttctgttttgtggcgttacaaagtatctgcttcttcgccaattttgtcgcc
tacgcagctatggtacatctgttctggcctcagagcgtgttgcaaaagttgttgtgctca
aatgacgatttcgattcgtcaaaagattcggccgactgggacgaatacgaacaggcgatc
attatcagttcaagtgatcgttga

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