Trichinella spiralis: Tsp_09891
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Entry
Tsp_09891 CDS
T01609
Name
(RefSeq) transcription mediator subunit Med12 superfamily
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_09891
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
Tsp_09891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
10907908
NCBI-ProteinID:
XP_003370677
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MTTSSEKVQYAVASTVLRKFRNFQIVGNFALFTSTPFFAMASCTVAWEKKPLKRPRLGQP
DVYPQDPKQSEANYNDTFISSNFFNDELTAEKVRQGFIYKPPLLNEYESLRSQRFDENLE
DYFIKLTQSYNAIVNKKAEINALQDSYKKKSGFKEPSIWHVSVMLLAAKPKGQDTWFKDL
SGNKPLSALGKRFPFLNKKDEILYTLAEFNVPMVRVVWFLKMTNAHIAQQQECGKMKKKH
MSDPFADWTHLVMKYLRDLCSKLGEFFSLNLEVPMNSEFECHYRHWQYTTKLTRHLFEEG
LLDKEILLNGLLDIFAEKIYASSFGILKMLVPVLLQFIDGFVMSVLLSRRLVYLACKVLS
AMKIDNLQKNSENMKEEEEEEGALDYLNCPFHRTVLFGLSNVIHAVLIDCPTALIWNEME
CEDTGENGKAYLCGSPLDLLYCSPVDLPLFVDPSTEFKELERLTEMVTERSRAVESHWSY
NKCQHSGTIIQHFLSILDCLDKFKFEYVNETNNIDTLYKTIFQSEKKEMRVDVDSIAVQF
LCHWAVSPHRYGSYRAAVVTRLFERHLQELSKKMPQVRHPFQKSLFNYLHNQAPNLGEMC
SSSEIKPFTNLILLFSRLIESDIFSHDQYVSTLVSSGDLIPNGANIFHPLQNQCSSSSSA
VENVSNTQSAVLMSSNFFSEQFKPIENVDFNYFKDSDESKLDFDRIIDFADKKTTSSDTG
ENSCSSKRVPKLSKHYFNVLHFPVPQDDQYRHECNQRQLLLFGSNSDQYSRKHILKKLTK
ELNKLWSKKTSAELTTTGLIRVRKIIDSESLCSLSRKIRNLVFYDQFAVMDCCCDAGIAQ
FNSFISGQSNCLPTLENFDFLLGLLEESSNFISLVEFVEAVCENTPCAWSATCASIIVTS
YSWSRSCATFGAVCCFM
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcgagtgaaaaggtacagtatgccgttgctagtacagtactccggaaattt
cgaaactttcaaatagtaggaaattttgctttgtttacttcaacgccattctttgctatg
gcgagttgtactgtggcttgggagaaaaagccattaaaacgtcccagacttggtcaacca
gacgtttacccgcaagatccaaaacaaagcgaggcaaattataacgatacatttatttca
tcaaatttttttaatgatgaattgactgcggaaaaagttaggcaaggatttatatataag
ccgccgctactgaacgaatatgaatcgcttcgatctcaacgcttcgacgaaaatttagaa
gactattttattaaacttacacaaagctacaatgctattgtgaacaaaaaagcagaaatt
aatgctttgcaagattcttataagaagaagtccggtttcaaggagccgtcaatatggcat
gtgagtgtcatgcttttagctgcgaaaccaaaaggacaggatacttggttcaaagattta
tctggcaacaagcctttgtcagctcttggaaaacgatttccatttttgaataaaaaagat
gaaatcttatatacattggcggaattcaatgtaccgatggtcagagtagtttggtttttg
aaaatgaccaacgctcatattgctcaacagcaagaatgtggaaaaatgaaaaagaaacac
atgagtgatccatttgcggattggacacatcttgtgatgaaatatcttcgggatttatgt
tcaaagttgggtgaatttttttcgttgaacttggaagtgccgatgaattcggaatttgaa
tgccattacaggcattggcaatacacaactaaactaactcggcatttgtttgaagaagga
ttgttggataaagagatattgttgaacggtcttttagatatttttgcggaaaaaatttac
gcatcttcttttggaattctgaaaatgcttgtgccagttttgcttcaatttattgacgga
ttcgtgatgtcagtgttattatcaagaagactggtctatttggcttgcaaagtgctgtcc
gctatgaaaattgacaaccttcaaaagaattctgagaatatgaaagaagaggaggaggag
gagggtgcgttggattatttgaattgtccgtttcatcgaactgttctattcggcttgagc
aatgttattcacgctgtgctgatagattgtcccacagctctaatatggaatgagatggaa
tgcgaagatactggtgaaaatggaaaagcatacctttgcggttctcctttagacttgctt
tattgttctccggtcgatcttccgttatttgtggatccgtcgacggaatttaaagagttg
gaacgtttgacagaaatggtgaccgaaagaagcagagcagtagaatctcattggtcatat
aacaaatgtcaacattctggtacaattattcagcattttttgtcaattttggattgtttg
gataaatttaaatttgaatatgttaacgagacgaacaatattgatactttgtataagaca
atttttcaatcggaaaagaaagaaatgagagtggatgtggattcaattgcagttcagttt
ttgtgccattgggcagtcagtcctcatcggtacgggtcttacagagctgcggttgtgacg
cgtcttttcgaaaggcatctgcaagaactttcgaagaaaatgccacaagttcgacatccg
tttcaaaaatcgttgttcaattatttgcacaatcaagcccctaatttgggtgaaatgtgc
tcgtcgtcggaaatcaaacctttcacaaatttgattttattattttctcgtctgatcgaa
tcggatattttttctcacgatcagtacgtgtcgacattggtatccagcggggatctgata
ccgaacggtgcgaatatttttcatccattgcaaaatcaatgctcatcctcatcatctgct
gtcgaaaatgtctccaacacccagtctgcagttttgatgtcaagcaattttttttctgaa
caattcaaaccaattgaaaatgtcgattttaattatttcaaagattcggatgaatcaaaa
ttagatttcgacagaattatcgactttgcagataaaaaaaccacttcttccgacaccggt
gagaattcgtgttcttcgaaacgtgttccaaaattgtccaagcactatttcaatgttcta
cactttcctgtacctcaagacgaccagtacagacacgagtgcaatcagaggcagttgttg
ttgttcggttccaattcagaccaatattcaagaaagcatattttaaaaaagttaaccaaa
gaattgaataaattgtggagcaagaagacttctgcagaattgacgaccaccggtctgatc
cgagtgaggaagattatcgattccgaatcgctttgttcattatctcgaaaaatacggaat
ttggttttctatgatcagtttgccgtgatggattgttgttgcgacgcgggtattgctcaa
tttaacagtttcatcagtggtcagtcgaattgtttgccaacgttggaaaattttgacttt
ctgctcggcctgcttgaagaatcgtccaatttcatttcattggttgaattcgtggaagcg
gtatgtgagaatacgccgtgtgcatggtcggctacatgcgcaagcatcattgttacttca
tacagttggagtcggtcatgtgcaacatttggcgcagtttgttgctttatgtga
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