Trichinella spiralis: Tsp_09969
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Entry
Tsp_09969 CDS
T01609
Name
(RefSeq) putative transcription factor COE1
KO
K09103
early B-cell factor
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_09969
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
Tsp_09969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
10908070
NCBI-ProteinID:
XP_003370758
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MFSFHDAAALLPRGTGASSAQLGSVSSSIKEEPLSGLRASWMTPTVVEPSSVSAQLARAH
FEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTQFLDFVEKDKEPDSHKTNNGIHYKVS
LLYANGVRQEQDLYIRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCEKKSCGNR
NETPSDPVIIDRFFLKCFLKCNQNCLKNAGNPRDMRRFQVVISTSARVDGALLAVSDNMF
VHNNSKHGRRTRRVDPTEATPSIKAICPSEGWTTGGATVIIIGDNFFDGLQVVFGSMIVW
SELLTPHAIRVTTPPRHIPGVVEVTLNYKSKQFCRGTPGRFVYVSLNEPTIDYGFQRLQK
LIPRHPGDPDRLPKEMILKRAADLAEALYSMPRGQQLTSFAPPRSPTHHLNYSATAYPVT
YAASPLDGAALTGMGSITPFAGMNPFALSSTCTSSPYSNIMTTPK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttcacgacgcggcagctctgcttccaagaggtacaggcgcttcaagtgcc
caacttggttcagtcagttcgtcaattaaagaggaaccactgagcggtttgagggccagc
tggatgacacccacagtggtggagccaagctctgtcagtgcacaactggctagagcacat
tttgaaaagcagccgcctagcaacttacgaaaaagcaactttttccattttgtcattgct
ttgtatgatcgagctggccagccagtagaaattgagcggactcagtttttagactttgtt
gaaaaggataaagaaccagacagtcacaaaacaaacaatggtattcattacaaagtgtca
ttgttgtatgcaaatggcgttcgacaagaacaagatttgtatatacgtctcatagacagc
gttacaaagcaggcgattgtttacgaaggtcaagataaaaatccggaaatgtgccgtgtg
cttttaactcacgaagtgatgtgcagtcgttgctgtgaaaagaaaagctgtggcaatcgc
aatgaaacgccttcagatcctgtcattatagaccggttttttctcaaatgtttcctaaag
tgcaaccaaaattgtttgaagaacgctggaaatccacgtgatatgcgtcgctttcaggta
gtaatttccacatcagctcgagtagatggagccctattggcagtttctgataatatgttt
gttcataacaattctaaacatggtcgtcgtacccgtcgcgttgatccaactgaagccaca
ccctccatcaaagctatctgtccaagcgaaggatggactactggtggagcaactgtaatt
ataattggagacaactttttcgacggtttgcaagttgtatttggctcaatgattgtctgg
agcgagcttcttactccacatgccattcgtgtcaccactcctcccagacatattcctgga
gttgttgaagttacgctgaattacaaatcaaagcagttttgcaggggaacacctggtcga
tttgtatatgtttcattaaatgaaccaactattgattatggctttcaaaggcttcaaaag
ttgatacctcgtcatcctggagatccagatcgtcttccaaaagaaatgattctgaaaaga
gcagctgatctagcagaagctttgtacagcatgccaagaggccaacagcttacatcattt
gcgccaccaagaagtcctactcatcatctgaattattctgccactgcatacccggtcact
tatgctgcgagtccattggatggagctgctttaactggaatgggcagcataactccattt
gctggtatgaatccatttgcattgtcctcaacttgcacctcgagtccatacagcaacatc
atgacaactccaaagtga
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