KEGG   Trichinella spiralis: Tsp_10041
Entry
Tsp_10041         CDS       T01609                                 
Name
(RefSeq) WD domain, G-beta repeat-containing domain protein
  KO
K04497  groucho
Organism
tsp  Trichinella spiralis
Pathway
tsp04310  Wnt signaling pathway
tsp04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    Tsp_10041
   04330 Notch signaling pathway
    Tsp_10041
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tsp04812]
    Tsp_10041
Cytoskeleton proteins [BR:tsp04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    ADF / Cofilin
     SCMC complex
      Tsp_10041
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz TLE_N WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 10905523
NCBI-ProteinID: XP_003373195
LinkDB
Position
Unknown
AA seq 717 aa
MSYGLNVEMHKQTEIAKRLNAILLQHQQQVIAAVDRAKQVTASELNTIIGCKFFSCVSLY
HSFIDRTDYQQMHAQQLAAHAVATGSAMGPPGLPTGLGPSPHAGLNPTNLPPGIPAASLA
ASGLLSLPNPLAAQLSGFPTPLPPCLKDERSSGSARPASVDDRMPSRSSASPPVRRSRSP
EGAERKRVKVEMNDSDDNKSNDELVVDVQNEDPVSPISSEKTPPENGIVNDKVPHPAYKS
KAERSDSPHSTTSSTSGGHTPGIRKEHDKSVTPVNYKSVTPTSSGKTTPNCTSARLAAKT
SLISEPWSLGHESVFDPLIAPYSTLVLPPAAIPPLTVTGEVSPGYANNLIHGSMSPGLGP
YGRNPMLASFDPHAQVRLAGLSSIAGFPAGGKPAYSYHVSADGQMQPVPFPADALVGTGI
PRNARQLSSLPHGEVVCAVAISNPTRHVYTGGKGCVKIWDIVQPGVRVPAHSLECLKESY
IRSCKLLKDGCTLIVGGEAQIITIWDLTGIPKIKAELNNNAQACYALAISPDNKLCFSCC
ADGNIAVWDIQNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGKQLQQ
HDFTSQIFSLGYCPTGEWIAVGMENSNVEVLHCSKPDKYQLHLHESCVLSLKFAQCGKWF
VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISGDDKYIVTGCGDRKATLYEVIY
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgtcctatggcttgaacgttgaaatgcacaagcagacagaaattgcgaaacgtttgaac
gccattttgcttcagcatcagcaacaagttattgcggctgttgatcgagctaagcaagtt
accgcatctgaactgaacactataattgggtgtaaattcttctcttgcgtatccttgtat
cattcatttattgaccgaaccgattatcaacaaatgcatgcacagcaacttgccgctcat
gctgttgccactggtagtgctatgggccctccaggtcttccaactggattaggtccgtca
ccacatgctggtcttaatccaactaatctaccgcctggaataccagccgcatctttggcc
gcctcagggcttctttctttgccgaacccacttgctgctcagttgtctggatttcctaca
ccacttccaccgtgcttgaaggacgaaagaagttccggttctgcgcgtccggcttctgta
gatgatcgaatgcctagccgaagttcagcaagtcctcctgttcggcgatctcgatctcct
gaaggagcggagagaaaacgggtcaaagtggagatgaacgacagtgatgacaacaaatcc
aacgatgaattggttgttgatgtgcaaaatgaagatcccgtttcaccaatcagtagcgag
aaaacaccaccagaaaatggaattgtcaatgacaaagtaccacatcctgcgtacaaaagc
aaagctgagcgttcggatagccctcattcaacgacaagctctaccagtggtggacataca
cccggaattcgaaaagagcacgacaaatcagtcaccccagtcaattacaaatcggtcacg
cccactagttcgggtaaaacaacccctaattgtactagtgcccgtcttgcggcgaaaact
tcactcataagtgagccttggtcgcttggccatgaatccgtttttgaccctttaatcgcg
ccgtattcgactcttgttttgccgcctgctgcaataccacctctaacggtgactggcgaa
gtcagccccggttatgccaataatttgatccatggtagcatgagtcctggcctgggcccc
tatggtcgaaatcctatgctggcatcttttgatcctcacgcccaagtgagacttgccggt
ctgagcagcattgccggatttcctgcaggaggaaagcctgcctattcttatcatgtttct
gcagatggtcagatgcagccggtcccttttccagctgatgctttagtaggaacgggaata
cctcgcaatgcgaggcaattgtccagcctgccgcacggtgaagtggtttgtgcagtggcg
attagcaatccaactcgtcacgtttatactggtggcaaaggttgcgtgaaaatatgggat
attgttcaacccggcgtgcgagttcctgctcacagtttggaatgtctaaaggagagttat
atacgtagttgcaaacttttgaaagacggttgtacacttattgttggcggtgaagcgcag
ataattaccatttgggacttaacgggcatacctaaaatcaaagcggagttgaacaacaat
gcccaagcttgttatgcattggccattagtccggataacaaactttgcttctcttgctgt
gctgacggcaatatagcagtttgggatattcagaatcaaacactggttcgacaatttcaa
gggcacacggatggtgctagctgcattgatatctcaaacgacgggacgaaactgtggaca
ggtggtcttgataacactgtccgatcatgggatctccgagaaggaaagcaattacagcaa
catgactttaccagtcagattttttcacttggttactgtccaacgggcgagtggattgcc
gttggaatggaaaatagcaatgttgaggtacttcattgttccaagccggataaatatcag
ttgcatttacatgaaagctgtgttttgtcgttgaaatttgctcagtgcggtaaatggttt
gtatcgacaggaaaagacaatctgctcaacgcctggagaaccccgtacggtgcgagtata
ttccagtccaaagaatcgtcttcagttcttagttgcgacatatctggcgatgacaagtac
atagttacaggctgtggagataggaaggctactctttatgaagttatttactga

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