KEGG   Trichinella spiralis: Tsp_10055
Entry
Tsp_10055         CDS       T01609                                 
Name
(RefSeq) putative HEAT repeat-containing domain protein
  KO
K15426  serine/threonine-protein phosphatase 4 regulatory subunit 4
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsp01009]
    Tsp_10055
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_10055
Protein phosphatases and associated proteins [BR:tsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     Tsp_10055
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     Tsp_10055
SSDB
Motif
Pfam: HEAT Parvo_NS1
Other DBs
NCBI-GeneID: 10905554
NCBI-ProteinID: XP_003373209
LinkDB
Position
Unknown
AA seq 840 aa
MSGDIPLDIDQITADQLIAVLTFSLPVLIYVIAFIAVAIYDFAMQTSAVDIECTSIFLSG
CSFILKHVIQSFTIYLTFGFYSTPLGIDVAMWTTCRECERWIRKPTNLRGAKFAWLFGQQ
TQTTQRCSTYGGIVRAAWMEMIIDVIDVISTPLLTSEVLPTALQKSQQMNSIYARLFGGK
LLGQIAPKISPDDSADIKSILLPMLIELNKDEDETVREADFEAIVSVLFRFDKETRSNIF
MPIIKKCAEDALLTKSTSSLLILAKVLKKLCESLDDKMTNSEKTWIIEIFQQLSSLGTEE
KPDGEETVNGDYILTELMTLNEFRTSLLPVYRRLCQDTDSEVQKQAALSFHIIAKFFDPH
SSELMDCFIDLIYSGDTDVIEGLAKHLDETLSYMYKTSPPKKDSEIPTHKSHPSQLTRVL
LACNRLIRNSSNWRCHEQYILALRSLLSCVGEDVLITSFVPMLKDEVLHVHNLNKLEKSC
SIGQFTFNMIFRLLLIGLQCHKSAKRRVLYLVACEMAIKMGLVELFKEKLLYSALKMIDD
PVIDVRLFPVFKSALNLPKENNLLLGLRDALSKLDAVEKSVTFKRIRAQLDKAGEAVSDT
KSGHIPRASSRRTAVVQPQQLLHRDASPRPTGQSYERVRTRHMTDSKPTSVDCKKASNIP
VKAKSVSQISTSENKTAAYKRTSVDKSKTTQKTSSNENLTTPNQKNAAAEKRKLTPGSYN
NSTVSKKNVAAEKSKNAESPNAPPQPVALTKGGPNGKKIVVKPTPILKMNKPSVASKPLR
TPAVICTGSVMKSIAKFEQSMAKHQESLMKKTTSHQYPRRMKKEWLNFKCTEHNSKWIAV
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgagcggagatattccgcttgatattgaccaaatcaccgctgatcaactgattgctgta
ctcaccttttcactacctgtgcttatttacgtaatagcttttattgctgttgctatttac
gattttgctatgcaaacatctgcagttgacatagaatgcacgagcatttttctatctgga
tgcagtttcatactgaaacatgtcattcaatcctttactatttatttgacttttggattc
tattcaacgcctctggggattgatgttgccatgtggaccacatgcagggaatgtgagcga
tggatcagaaaaccaacgaatttgcgtggtgcgaaatttgcctggctttttggtcaacaa
actcaaactactcagagatgttctacctacggtggaattgttcgagcagcttggatggaa
atgattatcgatgttatcgacgtcatttcgaccccactgctgacaagtgaagttttacca
actgctttgcaaaaatctcagcaaatgaattccatttacgctcgtttatttggagggaaa
cttcttggacaaatagcacctaaaatttcacctgacgattctgcagatataaaatctatt
ttgcttcctatgctaattgaactgaacaaagatgaagatgaaactgtccgtgaagctgac
tttgaagcaattgtcagcgttttatttcgattcgacaaagaaacccgctcgaatatattc
atgccaataataaagaaatgtgctgaagatgctttgttaacaaaaagcacgtctagtttg
ttgattttggctaaagttctgaaaaagttatgcgagtcattggatgataagatgacaaat
tctgaaaaaacatggattattgaaatatttcagcagctatcttcgcttggcacagaagaa
aaacctgacggagaagagactgtaaatggagattacattcttacggaactgatgactttg
aacgaatttcgaacctcacttttaccagtatatcggcgtttatgccaagacacggacagt
gaagtgcaaaagcaggcggctttgtcttttcacattatagccaaattttttgacccgcat
tcgtcagaattgatggattgtttcattgatctgatatactctggcgatactgacgtaata
gaaggtcttgctaagcatttggatgaaacattgagttatatgtacaagacgtccccaccg
aagaaggattcagaaataccgactcataaatcacacccatctcagctcactcgtgtactt
cttgcgtgtaatcgtcttataagaaattcgagcaattggagatgtcatgaacagtatata
ttggctttacgatcacttttaagttgtgttggtgaagatgtgctaataacaagctttgtt
ccaatgctaaaagatgaagttttgcacgtgcacaatttaaataaacttgaaaagagttgc
tcaattggacagttcacttttaatatgatattccggctgctattgataggccttcagtgt
cataaaagtgccaaacgacgagtattgtatttggtggcttgcgaaatggcaattaaaatg
ggattggttgaactgttcaaagaaaagctcttgtattcggcattaaaaatgatcgatgat
cctgttatagatgttcgcctttttccagtattcaagtcagcgcttaatttgcctaaagaa
aataatctcctacttggactgcgagatgctctttcgaaattggatgctgtggaaaaatcg
gttacttttaaacgaattcgcgctcaactcgataaagcaggggaagcagtttcagataca
aaatctggacacatcccacgtgcaagcagtcgcaggacggctgttgtacaaccacagcaa
ctgcttcacagagatgccagtcctcgaccaaccgggcaatcttacgaacgtgttagaacc
agacatatgacagattctaaaccgaccagtgtggattgtaaaaaggctagcaacatcccg
gtgaaagccaaatccgtttcccaaatttctacatcagaaaacaagacagcagcatacaaa
agaacctcagtggacaaatcaaagacaacccagaagacttcttcaaatgaaaatctaacg
acaccgaaccagaagaatgctgctgctgaaaagcgaaaactcacaccaggatcttataat
aatagcacagtatcgaagaagaatgttgccgcggaaaaatccaaaaatgcagaatcaccg
aatgccccaccgcagccggttgcattgacaaaaggaggaccgaatggaaagaaaattgtt
gtcaagcctactccaattttgaaaatgaacaagccaagcgtagcttcgaagccgctgcgc
actccagccgttatctgtaccggaagtgtgatgaagtccatcgccaaatttgaacaatca
atggccaagcatcaggaaagtcttatgaaaaaaactacatcccatcaatatccaagacga
atgaaaaaggagtggctcaacttcaaatgtactgaacacaattcgaaatggatcgcagtc
tga

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