Trichinella spiralis: Tsp_10065
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Entry
Tsp_10065 CDS
T01609
Name
(RefSeq) putative tetratricopeptide protein
KO
K03350
anaphase-promoting complex subunit 3
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_10065
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_10065
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_10065
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_10065
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
Tsp_10065
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
Tsp_10065
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
Tsp_10065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_8
TPR_1
TPR_2
TPR_12
TPR_CcmH_CycH
TPR_16
ANAPC3
TPR_14
TPR_19
TPR_6
TPR_7
TPR_11
TPR_9
HEAT_Nup120
Consortin_N
ARM_TT21_C
DUF503
Motif
Other DBs
NCBI-GeneID:
10905565
NCBI-ProteinID:
XP_003373220
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MVHTLLEYYMYDDAIEAAEFFHSIDKTEDALFLLASCYVRAGKFDMAINLINSKLITSTR
LKYLLGRCYFAKQDKWDKAVIALSQVAGDSSLIGAFASSMLAFMHNRSQPMSALSNHRNA
LKKCPYLFTSLRGLLHLRRDFQPINFFPSIKKERTRLDDLQLLWRAEMIGQDPLFSQRLK
LSTIPYSMLIPRCEFDISDEEEEEEESDMECSPPKYVSPWRQLKPANLCSGRHGGKGRKK
RKTTSRKVRYTLEQVVDPLVVRENSNNTKDVNPPTEDLSNANNSVRTQSPSKLKKEAPKP
FVLVCSELSTLIKASLSDEMRRNVIENCEKKKLHYDIRLLAETYCLVMEIEVALANYHFE
EAHNRYYKLRRELRICPAALRAVARTYLEESNYKEAVYYYEMYHREYPHLTDDIDYYSTA
LWYLRRESSIAFLCCDMLNTAYDDPHTWAVLGNACSLKKRHELAIQCLERALELDKHYFY
GHILLGHEWSALDDTDQADHYFKEALRLRPRHHSPWFSLGYVAFRSQDMENAEAYLLRSL
SLNPKSPSIQLISLLKVLEARGRKRMAGQILNYTLKIAPNNTFCRFTRAMAQKELMDLKR
IIPSEPIVYFLLGRVYKEMNEPHSAMVNFAHAVTLDPNLEQLQVMAQQNSREHRFSIMSL
EGIIQPCRSRLNFPCVDHDDDDQAYYCLIVDW
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacactctgttggaatactacatgtacgacgatgccattgaagcagcagagttt
ttccattccattgataaaactgaagatgcgctgtttttgcttgcgtcttgttatgtacga
gccgggaaatttgatatggcaatcaacttgataaatagtaaattgataacttcgaccagg
ttgaaatatttgcttggtcgatgctattttgctaagcaagacaaatgggataaagcggtg
attgctctttcccaagtcgctggagattctagcctgatcggtgcatttgcgagttccatg
cttgctttcatgcacaacagatcgcagccgatgtcggcgctaagcaatcaccggaacgcg
ttgaagaaatgtccatatttgtttacatcgcttcgtggcttattgcatttgaggcgtgat
tttcaaccaatcaatttttttccttcaattaaaaaagaacgcacccgactcgacgatttg
caacttttatggagagctgaaatgattggtcaagatccgttgttttcccaacgattgaaa
ctgagcacaattccatattcaatgcttattcctcgttgtgaattcgatatttctgatgaa
gaagaagaagaagaagaaagtgatatggaatgttcaccaccgaaatatgtatctccatgg
cgtcagttgaagccggcgaatctttgttccggccgacatggtggaaaaggcaggaagaaa
cgaaaaactacatcacgcaaggtccgttacactctagaacaagttgttgatccgttggtt
gtaagggagaattcaaacaatacaaaagatgtcaatccaccaacggaagatttgagcaat
gcaaataatagcgtgcgaacgcagagtccgtcgaaattgaaaaaagaagcaccgaagccg
tttgtgcttgtatgttctgagctgtccacattaattaaggcttctttatctgacgagatg
cgcagaaatgtgattgaaaactgtgaaaaaaagaaattgcattacgacatccgtttgtta
gctgaaacatattgtctggtgatggagattgaagttgctttggctaattatcatttcgaa
gaggctcacaacagatattacaaattgcgacgtgagctacgaatttgtcctgcggcgttg
cgagcagtcgcgagaacatatttagaagagtcgaattacaaagaggctgtttactattat
gaaatgtatcatcgtgagtatccgcatttgacggatgatattgattattacagtactgca
ttgtggtatttgcgtcgagaatcaagcattgcattcttgtgttgtgatatgcttaataca
gcctatgatgatccacatacatgggcagtgcttggaaatgcatgcagcttaaaaaaacgt
catgaattggcaattcagtgtcttgaacgcgcattagaactagacaagcattatttctat
ggacacatactgcttggtcacgaatggtcagctttggacgatactgatcaagctgatcac
tatttcaaagaagctttgagactccgtccacggcatcactctccttggttttccttaggt
tatgttgccttcagatcgcaagacatggaaaacgccgaggcatatttgcttcgttcgttg
agtctcaacccaaaatctccgtccattcagttgataagcttgttgaaggtgttagaagct
cgtggtagaaagagaatggcaggacaaattttgaattatactttgaaaattgcaccgaat
aatacattttgtcgttttacaagagcgatggcccagaaagaactgatggatttgaaacgt
ataatacccagtgaaccgatagtctactttttgcttggcagagtttacaaagaaatgaat
gaaccgcacagtgctatggtaaactttgcacatgctgtaacgttggatccgaatttagaa
cagctgcaagttatggctcaacagaattcgagagaacatcgattttccatcatgagtttg
gaaggtataattcagccttgccgaagccgtctaaattttccgtgtgttgatcatgatgat
gatgatcaagcttactactgtctgattgttgactggtga
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