Trichinella spiralis: Tsp_10076
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Entry
Tsp_10076 CDS
T01609
Name
(RefSeq) intraflagellar transport protein 140
KO
K19672
intraflagellar transport protein 140
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsp03037
]
Tsp_10076
Cilium and associated proteins [BR:
tsp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
Tsp_10076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_2nd
Beta-prop_IFT140_1st
TPR_IF140_C
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_2
WD40_WDHD1_1st
TPR_12
TPR_COPA_B
WDR55
Beta-prop_RIG_2nd
TPR_8
WD40_Prp19
Beta-prop_CAF1B_HIR1
Clathrin
ANAPC3
TPR_IFT80_172
Beta-prop_EML
TPR_GEMI5
MIT
Motif
Other DBs
NCBI-GeneID:
10905577
NCBI-ProteinID:
XP_003373232
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MALFNNKELLLDERNEHSQVVCFDMHPIYNTVAVSLQHSSLAEIQIFNFEGSRLDNGELK
LFSESFSILQWHPTATLLAFCETKRTFGIFNIKTKEIFNVSSNTDAQTNIIQWNESGNIL
FFSTLSGDCFIYKISDTGIIYALFDHNNFENCYALKNSVGRLLLSQDGRTLIAVTEDLFL
TQFTIDAYCKLTKTTEVKLSFRSKCLEVTWAGQNLLAFCSGENVVRFWNVALETNSTLSI
SDCPELYGDDKIYKIAYSSFKETLAVGTSSGKIILWRQKQQASSKDESHRWYMIAVLKYL
TMPSKIQLSKSHSTFATSSNYSVCIYSEQPVLFCSTEEIIVVQNMKKSVSVYSISNGTSS
QVTLDRAITAMCIDGNHAVLSDGFVVEIYKLTESKTLEKIGGFKMSSTAVAIQGTNIFFT
DSNRIQVRTLQGVIKQFVPLPDSEGDAIRFAIGGQRVCVATKSGSLRIYDNRKKILLQCC
VKLSKASKPQASTAQDAAAVSQFRNLCSSLFFPAKFVQTDKSLDASIYVWDALSDKVHFF
DFQTCTSGKLRPKQKKRYTNHRKQFPQNFCSGYPVEHLWDGIDCRMLLCQIVASSIPSDN
SAISSPCENCSLIAIFFVHSELDMLLQRIILLSSEFDTLIASRMPYYFFATKECNALEDG
NSALCVDDDAKKVDELLIRLTQREFIGLENCDSESKAAILDFSMHLAAENTEEALKAIRS
IKTTTVWKNVAKMCVRCRRLDVAMFCLKKIGNARIIRNIRHARQSITQTEALLGILAIHL
GLTNLAVEFFHNSGRYDLLNQLYQDLGNWEEAIKVAQNNDQIHLKNTHYRYGKYLQETGK
LHEAIEYFEKASVEAIEIPRLITESVAQLEAYVQQKQTKCTLDWWAQFLESRGQLDEAMK
AYTKANDICSVIRILCHQGNAKEAVNLAETTNDRSAYYQLARHFESTNAKDQALQFFISA
EAYSSAIRLCKECGYETKMAELALKGSKSTMEDVAHYFECQSGKADVAVMLYCRVCGAIL
FAGIYKKALDLAFRTEQLSALNLITAGLEGSQDLAMIEKCAQLLIKNQQYTKAVELLAHA
NQCQIKIAILDITVRKGNSNLHGKPRYSNGQFGEFAHPQRSNSERKKLLEQLADCCVRQG
LYNSAAKKFIQSGCKIKAMKALIKSGDVEKVIFFANTARNKELYIIAGNYLQSLNWKQNG
KVVEQIVQFYKKAQAHQQLISFYYIWAQTEIQENGNYEKAVEILRECLENFRQQVPNERD
KEEKLISSIQSQLESIEQFLHLKKLYKVNQTEAIQFLEEMLRSEKKLIIRLGDIYSLIIG
YYLRQDSVEEVEHHLHQWLTREPKEQLDRYLEPKLYDKLLQMEQQYHTVLENDAQVQQVS
EDFISEISNK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcactatttaataataaagaactattgttagatgaaagaaatgaacacagccaagtt
gtgtgctttgacatgcatcctatttacaacactgtggctgtctcgctgcaacactcttca
cttgcagaaattcagatattcaatttcgaaggatctcgattagataatggtgagcttaaa
ttattttccgaatctttttccatattgcagtggcatccaaccgcaacgctgcttgcattt
tgcgaaacgaaacgaacattcgggattttcaacattaagacgaaagaaatttttaatgtt
tcttccaatactgatgctcaaacaaatattattcagtggaatgaatccggaaatattctg
ttcttctccactttgagtggggactgttttatctacaaaattagcgataccggaattatt
tacgctttgtttgaccataacaattttgaaaactgctatgcgttaaaaaattctgtcggc
agactactcctcagtcaggatggacgcactttaattgccgttacagaagacctatttttg
acacagttcacaattgatgcttattgtaaattaacaaaaactactgaagtgaagctcagt
ttcagaagcaaatgtcttgaagtaacctgggcaggacaaaacttgttagcattctgttca
ggcgaaaatgtagtaagattttggaatgttgctttggaaacaaattcaacattatccatt
tcggattgtccggaactgtacggagatgataaaatttacaaaattgcgtattcatcattt
aaagaaacactggctgttggtacctcaagtggaaaaattattctttggcgacaaaagcaa
caggcatcttcaaaagatgaaagtcacaggtggtacatgatagctgttctgaagtatcta
acaatgccatcaaaaattcaattatcaaaaagtcattcgacgtttgccaccagttcgaac
tactcagtatgcatttacagtgaacaacctgtactattttgttctacggaagaaataatt
gttgtccaaaatatgaagaaatctgtatctgtttacagtatatcaaacggaacgtccagt
caagtcacgttggatagagcaattacagcaatgtgcatcgatggtaatcacgcagttctg
tctgatggttttgtggtggaaatttataagttgaccgaatcaaaaactttggaaaaaatt
ggaggattcaaaatgtcttccacggccgtggctattcagggtacaaatattttctttacc
gacagtaatagaattcaagttagaactcttcagggtgtgattaagcagtttgttcctttg
ccggacagtgaaggtgatgccatacgttttgccattggcggccaacgagtgtgcgtagct
acgaaaagtggatcgttgagaatttatgacaatcggaagaaaattttgttgcaatgctgt
gtgaaactttcgaaagcatcaaaaccacaagcatcaactgcgcaggatgctgctgcagtt
tcacaatttcgaaatttatgttcatctttatttttccctgcgaaatttgttcagactgac
aaaagcttggatgcttcaatttacgtttgggatgctttgtcggacaaagtacattttttt
gatttccaaacctgcacctctggtaaactacgaccaaaacaaaagaagcgctacacaaat
cacagaaaacaattcccccaaaacttttgcagcggttatccagttgaacatctttgggat
ggtattgattgtagaatgttactctgtcaaattgttgcatcatcaattccatccgacaac
agtgccatttcttcaccttgtgaaaattgctcactgatagcaatcttttttgtccactct
gaattggatatgcttttgcaacggataattttattaagctcagaattcgacacgctaatt
gcctcaagaatgccttattattttttcgccactaaagaatgcaatgcattagaggatggt
aatagtgcgctttgcgtggatgatgatgcaaaaaaagtggacgagttgctcattcgatta
actcagagagaatttattggactggaaaactgcgacagtgaaagtaaagctgctattttg
gatttttccatgcacttagcggccgaaaatactgaagaagcactgaaagctatacgatca
atcaagacaacaacagtttggaaaaatgtagcaaagatgtgcgtcagatgcagacgctta
gatgttgccatgttttgcttgaaaaaaataggcaatgcgagaataattcgcaacatacgc
catgcccgtcagtcaatcacacaaacagaagcgctgttaggcattttggccatacactta
ggacttactaatttggcagttgaatttttccacaattcaggtcgttatgatcttttgaat
caactctatcaagatcttggaaactgggaagaggctatcaaagttgcgcagaataatgat
caaattcatttgaaaaacacacactacagatatgggaaatatctacaagaaacagggaaa
ttacacgaagcaattgaatattttgaaaaagcctctgtcgaagctattgaaattccccgc
ctaataacagaaagcgttgcacaattggaagcttacgttcagcaaaagcaaacaaaatgt
acgttggattggtgggcacagtttttagaaagccgaggccaactggacgaagcaatgaaa
gcttacactaaagcaaatgatatttgttccgttattcgcattctttgccatcaaggcaac
gcgaaagaggcagtcaatttagccgaaacaaccaatgacagatctgcgtattatcaatta
gctcgtcattttgaatcaacaaatgctaaagatcaagcattgcaatttttcatctctgcc
gaggcgtacagtagtgcaattcgcctttgtaaagaatgcggttacgaaacaaaaatggcc
gaattagcactgaaaggttccaagtctacaatggaagatgttgcacattattttgaatgt
cagtctggaaaagccgacgttgctgtgatgctttattgtcgagtgtgtggtgcaatattg
tttgctggtatttataaaaaagcgttggatttggcatttcgcactgaacaactttcggcg
ttgaatttgattactgccggcttggagggtagccaagatttggcaatgatcgaaaaatgc
gctcaattgttgataaaaaatcaacaatacaccaaagcggtggaactgttggcgcatgca
aatcaatgtcaaattaaaattgcaatactggatattacagtacgaaaaggcaattcaaat
ttgcatggaaaaccacgctactctaacggacagtttggtgaatttgctcacccccaaaga
agcaactcggaaagaaaaaaacttttggaacaattggctgattgttgcgttcgacaagga
ttgtacaatagtgcggcaaaaaagttcattcagtccggttgtaaaattaaagctatgaaa
gcgttgattaaaagtggtgatgtggaaaaagtgatattctttgcaaacacggctagaaac
aaagaattgtacatcattgcaggaaattatttgcaatcactgaattggaagcagaatgga
aaagttgtcgaacagattgtccaattttataaaaaagcccaagctcatcaacagttgatc
agtttttattacatttgggcgcagacagaaattcaagaaaatggcaattacgaaaaagcg
gttgaaatattacgcgagtgtttggaaaattttcgtcaacaagtaccaaatgaacgtgac
aaggaagagaaattaatttcatcaatccaaagtcaacttgaatcgatcgaacaattttta
cacttgaaaaaactttacaaagtgaatcaaacggaagcgattcaatttttggaagaaatg
ttaagaagtgaaaagaaactaattatccgtttaggagatatttattcactgatcatcggc
tattatttgcgacaagattctgtggaagaggttgagcatcacttgcaccagtggttgaca
agagaacctaaagaacagctggatcgttatttggagccaaaattgtacgacaaacttctt
caaatggaacaacaataccatactgtattggaaaacgatgctcaagtgcaacaagtgagc
gaagatttcatttcagaaatatccaataaatga
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integrated database retrieval system
