Trichinella spiralis: Tsp_10111
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Entry
Tsp_10111 CDS
T01609
Name
(RefSeq) putative fibronectin type III domain protein
KO
K18584
actin-related protein 3
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
tsp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_10111
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
Tsp_10111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_10111
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsp04812
]
Tsp_10111
04147 Exosome [BR:
tsp04147
]
Tsp_10111
Membrane trafficking [BR:
tsp04131
]
Others
Actin-binding proteins
Arp2/3 complex
Tsp_10111
Cytoskeleton proteins [BR:
tsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
Tsp_10111
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_10111
Exosomal proteins of other body fluids (saliva and urine)
Tsp_10111
Exosomal proteins of bladder cancer cells
Tsp_10111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Ion_trans_2
fn3
Ion_trans
MreB_Mbl
Halogen_Hydrol
DUF7637
Lig_chan
FtsA
Motif
Other DBs
NCBI-GeneID:
10905774
NCBI-ProteinID:
XP_003373267
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MPSQQPQNIKSQIRWYEDEMCQEWLRYSKIGFAGNTHPNFIIPTVIACRSQSYNIPNTGR
MPIDMDFFIGDEALNATNYSIRYPVRHGVVEDWNLMERFLEHSIFKYLRIEPEDHNFLMT
ESPLNTPENREYLAEVMFESFNVPGLYIAVQAFLAVAASWVGCPQENRSLTAFVIDIGDG
ITHCVPVIDGYTLASCSRFMPIAGREVTFFIQNLLRERETGIPPEQSMETARNIKEKYCY
VSPNIMKEFSKYDENLSKFIKKYEGQHAVTKKPFHVDVGYERFLGPEIFFCPEFANADYK
RSLSEEVDLAIQQCPIDVRRALYGNIVLSGGSTMFKDFDRRIERDVRRLVNQRLQITEQL
CDHRITSEFAMSVHTKKEYDEIGPSICRRNAHNRLVMEERPSVDTSQHCQQQDEDDTLIL
DKTLQIGSHHKTTSTSQWKHILRIKEEHYYYVKKNITSCKVCKNLLTNIKNMLKKLNRSN
AYFYLILPHASLIIVSFLYTLIGAFVFMKLEQPHIRHLYNQKMIQMKADKDLLLERLIEM
SRAKSSMDEGETEFRNFVRSIYSMHKWNRWRNTENDRYARIVLQPNEISLNELIHPGQEW
NFAAALFFVLTTLTTIGYGDVTPLTKEGRIFCICYCIVGIPLFLVTTANTAKFLSSGVYY
LYVRYILIKEKLLKTSGCWWSKRVEYLHNDDRGNEKILLSDLKKIQYVRLSAPAILLIVF
GYCILGAALMQQIEPWAFIDSLYFTTISILTVGFGDIVPNAFHSLYIPVVYILFGLVITT
MAVDTVGVQYVQRIHQFGRSMTNADYIHLLRRMKMRKFESDEINTLPQMDMIAKIPTDPL
LVQVINVTPYSIKLRWDEGLEKCPDEEYILKYRAKGTFSLADHKQKRQYSLSLSDQPESS
PQDLAIAEVNQDSILLSWKPPFKNKHLVKAYAIYCTTDVELPYEGWRKILVPPNVFTCTI
NDINDISNCFFSMCSVYDTYHSPLSKPVSVVLSSTSKITEAD
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcaacagccgcaaaacataaaatcccaaattcgatggtatgaagacgagatg
tgtcaagaatggctgagatattcaaagattggatttgctggtaacacgcatcccaatttt
atcatcccaacagtcatcgcatgccgaagtcaatcgtacaacatacctaatactggcaga
atgccgattgatatggactttttcatcggcgatgaggctttgaacgcaacaaattattca
attagatatcctgtgcgacacggtgttgttgaagattggaacctgatggaaagatttttg
gaacacagcatattcaaatatctgcgtatagagccagaagatcataattttctaatgacc
gaatcaccgttgaatacaccagaaaatcgtgaatatttggcagaagttatgtttgaatcg
tttaacgttccgggcttatacatagcagtacaagcatttcttgctgttgcagcgtcgtgg
gtaggttgtccacaagaaaatcgctctttaactgcttttgttattgacattggtgacggc
ataactcactgtgtaccagtgattgacggttacacacttgcgtcgtgcagtcgatttatg
ccaatagccggccgggaagtaacatttttcatacagaatttgctccgtgaacgtgaaacg
ggcattccgccggaacagtcgatggaaacggcacgaaatattaaagaaaagtactgttat
gtgtcgccgaatattatgaaagaattttccaagtacgatgaaaatttgtcgaaatttata
aaaaaatacgaaggacaacacgcagtgacgaagaaaccgttccacgttgatgtcggctac
gagcgttttcttgggcctgagattttcttttgtccagaatttgcgaatgcagattacaag
cgatcgctttcagaagaagtggatttagccattcagcagtgtccaatcgatgtccgcagg
gcactgtatggaaatatagttcttagtggtggatcgacaatgttcaaagatttcgatcgt
cgaatcgaacgtgatgtccgacgcttggtcaatcaacgacttcagataactgaacaactt
tgtgatcatcgtattacatccgaatttgcgatgtctgtgcacacgaaaaaagaatacgac
gaaatagggccgtcgatttgccgtcgcaacgcgcataaccgactggtcatggaagaacga
ccgtcggttgatacttctcaacattgccaacaacaagatgaagatgatactttgatatta
gataaaacactccaaattggtagccatcacaaaacaacatcgacatcccaatggaaacat
atacttcgaattaaagaagaacattattactatgtgaagaaaaatatcacgagttgtaaa
gtttgtaaaaatctgcttactaacattaaaaacatgctgaaaaagcttaatcgcagtaat
gcgtacttttacttaattttgccgcatgccagcctgattattgtgtctttcctttacact
ttgattggtgcttttgtattcatgaagctggaacagccgcacataaggcatttgtacaac
caaaagatgattcagatgaaagcagataaagatttacttttggaacgcttgattgaaatg
agtcgagcaaagagttcgatggatgagggtgaaactgaattccgcaattttgtgcgcagt
atttactcaatgcataaatggaatcgttggaggaacacggaaaatgatcgctacgctaga
attgtgctacagcctaacgaaatcagtttaaatgaattaatacatcctggtcaagaatgg
aattttgcagccgctttatttttcgtgctgacaacgctaactacaataggatatggtgat
gtcactcccttgaccaaagaaggtcgaatattttgcatatgctattgcattgttggaatt
cctctgttcttggtcacaacagctaatactgcaaaatttttgtcttctggagtctactac
ctttatgttcgttacattctaattaaggaaaaactactaaaaacgagcggctgctggtgg
agtaaaagagtagaatacctgcataatgatgatagaggcaatgaaaaaatattattaagt
gatctgaaaaaaatacaatatgtgaggttgtctgcacctgcaattttgttaattgtattt
gggtattgcattttgggtgcagctttaatgcagcaaatagaaccatgggcctttatcgac
tctttatacttcacaacaatcagcattcttactgtcggctttggcgatattgttccaaat
gcttttcactcattatatattcctgttgtgtatatactttttggattggtgattaccaca
atggcagtcgatactgtaggcgttcaatacgtgcaacgaattcaccaatttggtaggagc
atgacaaacgctgattatatacatcttttacgtcgaatgaaaatgcgaaagtttgaatct
gatgaaatcaatacgttaccccaaatggatatgatagcaaaaatacctacagatccactg
ttggttcaagtcatcaatgtcactccttattcaattaaactcagatgggatgaaggacta
gaaaagtgtccagacgaagaatacatactcaaatacagagcaaaaggcacttttagtctg
gcggatcacaaacaaaaaaggcaatattcattgtctttaagtgatcagcctgaaagttcc
ccacaagatttggcgattgctgaagttaatcaagattctattcttctcagctggaaacct
ccatttaaaaataagcatcttgttaaggcatatgctatttattgtaccactgatgttgag
ttgccatacgaaggttggagaaaaattctcgtaccaccaaacgtatttacttgcacaatt
aacgacataaatgacatcagcaattgttttttttccatgtgcagtgtttatgatacatat
cattccccgctatcaaagcctgtgtcagttgtgctatcaagcacgtctaaaatcacagag
gctgattaa
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integrated database retrieval system
