Trichinella spiralis: Tsp_10222
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Entry
Tsp_10222 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_10222
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_10222
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
Tsp_10222
Protein phosphatases and associated proteins [BR:
tsp01009
]
HAD phosphatases
Fcp/Scp phosphatases
Tsp_10222
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
Tsp_10222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BRCT_2
LIG3_BRCT
Hera_DD
IL3
Motif
Other DBs
NCBI-GeneID:
10900963
NCBI-ProteinID:
XP_003372462
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MTLYDEMLLLNNDAHRSTASHSNITVVRTTEIVIKMNNKLLVYCSDFQDKQIMRDTSSKY
MDFIIEENMAETLEVEIVFDDPEGGKFLTWKVHEKSLVCPGNTLFTFLKGSQVIPFKCNK
YGVVKERYPIAPNEQLEVGRLIVKLGKCEHAVTMFGMCADCGTDLTSCVGEKIFLFILHS
NVKTRIEEGSSTPLSRASVPMIHGVPELLVTPEVALYHAEEDSKNLLSQKKLALLVDLDL
TLIHTSETSDDSDALDVYHYQMEGPNSPWYHTRLRPYARYFLKKINEYFELHIITHGNRK
YAEKVVKMLDPNNVLFGDRILSRDECFDPNMKAPNLKALFPGGDDLVCIIDDREDVWNYA
ENVVRVRPYRFFKHTDDFNAATLAELGNIIETELAKNVAGDEEDAGKDEVKLWLEKADEV
PTDNDPDNYLVYLFFLLRRIHETFYNVRKLTGNPKKTLSLKTVMNALRENVFKNLRFVFT
GLVPADQAITDSIFYYRSKQFGAVVQKEVVVHDGDETLPTTHLIAGKLDTEKVARARKSG
SVIIVSPAWFWTCVERWCRVPEKDYQLFLEDYKMTGRQSSTEADNYLINVDCISRKLADE
HMATLSSSANEEEEDLRNGNKRKCALEELSKFRSKFRRFESSDSSEDDDDDDDDDDDSDI
DSEDEEIGREIEGLLWENSDENL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgacgctttacgatgagatgcttttactgaacaacgatgcacacagatcaactgcttca
cattccaatatcacagttgtacgtacaacagaaattgtaattaaaatgaataacaaattg
cttgtatactgtagcgattttcaagataagcaaatcatgcgagacacgtcatcaaaatat
atggattttattattgaagagaacatggcagaaactctggaagtggaaatagtgtttgac
gatccagaagggggtaaatttttgacgtggaaagttcatgagaaaagtttagtctgtccg
ggcaatactttgtttacgtttctcaaaggatctcaggtgattcctttcaagtgtaacaag
tacggtgttgtgaaagagcgttatccaatagcgccaaatgaacaattggaagtcggcagg
ctgatagtgaagttgggcaaatgcgaacacgcggtgacgatgtttggtatgtgcgccgac
tgtggcacagatctcacatcgtgcgttggagagaagatttttctttttattcttcattcg
aatgtgaaaacacgaatcgaagaaggatcttcgacaccgttgtccagagccagtgtacca
atgatccacggtgttccagaattgctcgtcacaccggaggttgctctgtatcatgccgaa
gaggattcaaaaaatttactttctcaaaagaagctggccctgttggtagatctggattta
acattaatccatacatcggaaacgtcagacgattcggacgcgctggatgtttatcattat
caaatggaaggtccaaattcgccatggtaccatacacgtttgcgaccttacgcgcgttat
tttttgaaaaaaatcaacgagtactttgaattgcacattattactcacggtaaccgaaaa
tacgcggagaaggtggtaaaaatgctcgatccgaacaatgtgctgtttggcgatcgtata
ttatccagagatgaatgtttcgatccaaatatgaaagcaccaaatttgaaggcgttgttt
cctggtggcgacgatctggtttgcatcatcgacgaccgagaagacgtgtggaattatgcc
gagaacgtggtccgtgtgcgaccgtatcgttttttcaagcacaccgacgatttcaatgcg
gcaactttggcagaattgggcaatatcatcgaaacggaactggcgaaaaatgtcgctggc
gacgaagaggacgctggcaaagacgaggtgaagctgtggctcgaaaaagccgacgaggtg
cccactgacaacgacccggataattatcttgtttatttgttttttctgctccgtcgcatc
cacgagacattctacaacgtgaggaaattgaccggcaatccgaaaaagacgttgagcttg
aagacggtgatgaatgcgttgagggagaatgtgttcaaaaatttgcgtttcgtattcacc
ggtctggtgccggcggaccaagccatcacggattcgattttctattatcgctccaaacaa
ttcggtgcagtggtgcaaaaggaggtggttgtccatgatggtgacgagacgttgcccaca
actcacctcattgccggtaaattggacacggaaaaagtggcccgggccaggaaaagcggt
tcagtgatcatcgtctctccggcttggttttggacctgcgtggaacgttggtgtcgcgtg
ccagaaaaagactatcagttgtttcttgaggactacaagatgacgggacgacagtcgtcg
acagaagccgacaattatttgatcaacgtggactgcatcagtcgaaaattagccgacgag
cacatggccaccttgtccagttctgccaacgaagaggaagaagatttgagaaatggcaac
aagcggaaatgcgccttggaagagttgagcaaatttcgatccaaatttagacgtttcgaa
agcagcgacagttcagaagacgacgacgacgacgacgatgacgatgacgattctgatatt
gatagcgaagacgaagaaattggccgtgagattgaaggtctgctgtgggaaaacagtgac
gaaaatctttga
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