KEGG   Trichinella spiralis: Tsp_10280
Entry
Tsp_10280         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K03539  ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
Organism
tsp  Trichinella spiralis
Pathway
tsp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Tsp_10280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsp03009]
    Tsp_10280
   03016 Transfer RNA biogenesis [BR:tsp03016]
    Tsp_10280
   03029 Mitochondrial biogenesis [BR:tsp03029]
    Tsp_10280
Enzymes [BR:tsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     Tsp_10280
Ribosome biogenesis [BR:tsp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     Tsp_10280
Transfer RNA biogenesis [BR:tsp03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    Tsp_10280
Mitochondrial biogenesis [BR:tsp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    Tsp_10280
SSDB
Motif
Pfam: RNase_P_p30
Other DBs
NCBI-GeneID: 10901022
NCBI-ProteinID: XP_003372520
LinkDB
Position
Unknown
AA seq 188 aa
MASRLAKIHFVELNIVRRLDESEKHVVSAVKYAVEELGYTSVAVNVELSATNDNGQRNSG
LVVPEPLLVDWANVVERSKPWRLYTRLTLKVDSVDLLSSLMNNETVLKYDIIAVCPLSEA
IFNFVFDNVEVDLLTTDMMNRDVWFEDESCYRKAVQCGKFIEISYSPAILSAEKRIEIFS
HGNELFRY
NT seq 567 nt   +upstreamnt  +downstreamnt
atggcgagccggttggcaaaaatccacttcgtcgaattgaatatcgtacgccggttggat
gaaagcgaaaagcacgtcgtgtcggcggtcaagtatgccgtcgaagagttgggctatacg
agtgtggctgtcaacgttgaactgtcggccaccaacgacaatggccaacgtaacagcggc
ctggtagtgccggaaccgttgctggtcgactgggcaaatgttgtcgaacggtcgaaaccg
tggcgactgtacaccagactgacactgaaggtcgacagtgttgatctgttgagttcgcta
atgaataatgaaactgttctcaagtacgacattattgccgtttgtccattgtccgaggcg
attttcaactttgtctttgacaacgtggaagtggatctgttgactacggatatgatgaat
cgagatgtttggtttgaagatgagagttgctacagaaaggctgttcaatgtggcaaattt
atcgaaatctcttattcgccggcaatactgtccgctgaaaaaagaatcgaaatattttct
cacggaaatgaactttttaggtattga

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