KEGG   Trichinella spiralis: Tsp_10304
Entry
Tsp_10304         CDS       T01609                                 
Name
(RefSeq) putative DNA repair protein
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
tsp  Trichinella spiralis
Pathway
tsp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tsp_10304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_10304
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Tsp_10304
SSDB
Motif
Pfam: Keratin_assoc XPA_C
Other DBs
NCBI-GeneID: 10901049
NCBI-ProteinID: XP_003372547
LinkDB
Position
Unknown
AA seq 335 aa
MCRELKGKHSLITRTKAKELYLLKDCDFDLRAPPLRFAVRKNPHSARYGDMKLYLTIQVE
KRAIEVWGSVEELERQRQLRLRNREKWKEKRYDNKMRNLRKQVQSGVHEPKTHQHNFGDE
QFDKKNNSYFKNCVDCNFKIAYEKIIRLDAAVDFCIKLIVFLWLKVHVRLQATAVVESSC
GTLEVAIFNLKVRFACDCYELPEYAQVGMVLMLFCFIPFTLPFHFDRSVVLYVLPNSKMK
MHNSLSAILSITLSAAVYIVMQCLAAAFGISKVTTILCGFAGANIFVFILTAISNMEMHL
YGKNYQARFFPEVFIAMTAAAIASLTVHRICMTIW
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgtgcagagaattgaaaggaaagcattcactgataacgcgaacaaaagcgaaagaattg
tacttgttgaaagattgcgattttgatttacgcgctcctccattgcggtttgccgtgcgg
aaaaatcctcacagtgcacgctatggagacatgaaattatatttgacgattcaagtggaa
aagcgcgcgatcgaagtatggggaagtgttgaggaattggaacggcaacggcaactgcga
ctgcgcaatcgagaaaagtggaaagaaaagagatacgacaataaaatgagaaatctgaga
aaacaagttcaaagtggcgtccatgaaccaaagactcatcaacataattttggcgacgag
cagttcgacaaaaagaacaattcatatttcaaaaattgtgttgattgcaacttcaaaatt
gcatacgagaaaataattaggcttgatgcggcggtcgatttttgtataaaacttattgtc
tttctttggttgaaagtgcacgtccgattgcaggcaactgcagtggttgagagttcgtgt
ggtacacttgaagtggctatctttaatctcaaggttcgattcgcgtgtgactgctatgaa
ttacccgagtatgctcaggttggaatggtgctaatgttattttgttttattccgtttacg
ctaccatttcactttgaccgaagcgtcgtgctttacgttttaccgaacagcaaaatgaag
atgcataattctttgtcagccattttgtccataacactgtcggcggcagtatacatagtc
atgcaatgtttggctgctgcttttggaatatccaaagtgacgacaattttgtgcggattt
gctggtgccaacatttttgttttcattcttacggcaatcagcaatatggaaatgcacttg
tacggtaaaaattatcaggctcggttttttcctgaagttttcattgctatgaccgcagct
gcaatagcatcattgaccgttcatcgcatatgcatgacaatttggtaa

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