Trichinella spiralis: Tsp_10375
Help
Entry
Tsp_10375 CDS
T01609
Name
(RefSeq) putative neurotransmitter-gated ion-channel ligand binding domain protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
zf-U1
WW
Motif
Other DBs
NCBI-GeneID:
10902348
NCBI-ProteinID:
XP_003372813
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MTVQSEALCKNDSWIVDELLRVHHKNQLPTGGKVLVEIELWVQEISKINELRSEFELDIY
MTEAWNDPSLAFNHLNPCKGNLSLDSNTLLKRLWNPSCCFVNSKSASVHRSPFTNIFLMI
YSNGTVWVNYRIKLTGPCEKDLKTFPIDRQRCFLTYESFTYNADEVQLKWIDVNPITLLK
EIRLPDYKLIDYSALHVQRNYPPGRWHELTATFTFQRQYGFYILQAYVPAYLVVLISWIS
FFLDADMIQPRTMLGVHSLLALTFQFGSILTDLPKTSDVKAIDVWILCCMAFIFCSLLEL
AAVGYLTRNNINNTLKCECSWLCWKCPVLTAKKIDGVLIAQNSVELKLVEFRSPIYASST
MQASRSYIFGVLCLLSHNESFSNDDLKQPAELCTDNKPTVVDSKVDIPLTTLTAEFLKNN
IINIAQIMDQFIQQDPVDKRSYKSRRDVLEMISYYQEILHEKKYFDDDECNVTTIICEEK
FLLIYFRFILLHDSRNFTCSSSAQPVARMTEYWKSVPKKYCEICKCFYYDNKPSIQKHEQ
GARHKANVALKLRHVARQGRLRLKEAVETKKIISSMEKEALTSYNKDVKHGYVPKLSSQT
NAQGFTKKKTSSSASTRQFQDELAESAFAVWFESATPEGLLYYWNCATGESTWEQPAEGY
VSLAAQQKQMNRREVALGLAPGSSSQMAIRKNAGVAQRPETFAAFEQKSLPLVKQEAPVI
KQEEKYDAMLSSAYRTENEQSNEASVGHPYGEWQPVDKPIWNYCETDAETLDLMYQQSQS
TASTSEWHEENETLFKERQNPITSVSSESSSAKVEFKKRKPNNTANRRIVIE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcaatcggaagcactgtgcaaaaatgattcatggattgtggacgaactgctt
cgagtgcatcacaaaaatcagctgcccactggtggtaaagttttggtagaaattgaactc
tgggtacaagaaatatcaaaaatcaacgaacttcgctctgaatttgaactcgacatatac
atgaccgaagcttggaatgatccatcacttgcgtttaatcatctcaatccttgcaaagga
aatttatcactagacagtaacacgttgctcaaacgcctctggaatccgagctgttgcttt
gtcaacagcaaatcagcatccgttcatcgttctccatttacaaatatatttttaatgatt
tattcaaatggcacagtatgggttaattatcggatcaagttgaccggaccttgtgaaaaa
gatttaaaaacatttccaatcgaccgacaacgttgctttctcacctatgaaagtttcaca
tacaatgctgacgaagttcagctaaaatggattgacgtcaatccaataactttactcaaa
gaaattcgccttcctgattacaaactgatcgattactctgcactccatgttcaacgaaac
tatccaccaggtcgatggcatgagctgacagccacatttactttccagagacagtatggt
ttttatatactgcaagcgtacgttccggcctacttggttgtattgatatcttggatatcg
ttttttcttgatgcagacatgatacaaccgagaacaatgttaggtgtgcattcattgtta
gcactaacatttcaatttggttctattttaactgatttgccaaaaacttctgatgtgaaa
gccattgatgtatggattctttgttgcatggctttcattttttgctccctgctcgaacta
gctgccgttggttatttaacgcgcaacaatataaacaacacattaaaatgtgaatgctct
tggttgtgttggaaatgccctgttctgacagcgaagaaaattgatggtgtacttattgca
caaaattctgttgagttgaagctggttgaatttcgttcacccatttatgccagttcaact
atgcaagcatctcggtcatatatttttggtgtgctctgtttgttatctcacaacgagagc
tttagcaatgatgacttaaaacaaccggcagagctatgcactgataataaaccaacagtc
gttgattcaaaagtggatatacctttgacaactctaacagcagaatttcttaagaacaac
atcatcaacattgcacaaattatggatcagttcatacaacaggatcctgttgataagcga
agttacaaatcaagacgggatgttcttgaaatgatatcttattatcaagaaattctacat
gagaagaaatatttcgatgatgatgaatgtaacgttacaacaatcatttgtgaagaaaaa
tttctgctgatttattttagatttattttattgcacgacagccgaaattttacctgttca
agtagtgctcaacctgtcgcaagaatgacagaatactggaaatcggttccgaagaaatac
tgtgaaatatgcaagtgtttttattacgacaataagccgagcattcaaaaacatgaacaa
ggcgccagacacaaagcaaatgtggcactgaaacttcgccatgtagctcgacaagggcgg
ctgagattgaaagaagcggttgagacaaaaaaaattatttcatcaatggaaaaagaagcg
ctcacttcatataacaaggatgtgaagcatggttatgtcccgaaattatcgtctcagaca
aatgcgcaaggatttacgaagaaaaaaacatcatcatccgcttcgacgagacagtttcaa
gatgaattggctgagtcagcgtttgcagtttggtttgaaagtgcaactccagaaggatta
ctgtattattggaattgtgctactggtgagtcgacttgggaacagccagccgaaggttac
gtttctttggcagctcagcaaaagcagatgaatcgtcgtgaggtggctttgggtttagca
cctggttcgagttcacaaatggccattcggaagaatgcgggcgttgctcagcgaccagaa
acatttgcagcattcgaacaaaagtcgttgcccttggttaagcaggaggcgcctgtgata
aaacaagaagaaaagtatgatgctatgctatccagtgcttatcgaactgaaaatgaacaa
tcgaatgaagcatctgttggacatccgtatggagaatggcaaccggtagacaagccaatt
tggaattattgtgaaacggatgctgaaacgttggatttgatgtatcagcagtcgcagtca
accgcttctacttcggaatggcatgaagagaatgagacactttttaaagaaaggcaaaat
ccaattacgtcagtgtcatccgaatcatcttctgctaaagttgagtttaaaaagcgcaaa
ccgaacaacacggcaaatcgtcgcattgtcattgaataa
DBGET
integrated database retrieval system