Trichinella spiralis: Tsp_10426
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Entry
Tsp_10426 CDS
T01609
Name
(RefSeq) protein maternal effect lethal 26
KO
K03876
BTB domain ubiquitin protein ligase cofactor
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_10426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_10426
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
Tsp_10426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dcc1
BTB
MATH_2
BACK_BPM_SPOP
BACK
DksA_N
Motif
Other DBs
NCBI-GeneID:
10902402
NCBI-ProteinID:
XP_003372867
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MSMSPEKVYDMIHPTSEYRFMWDAHVDKWFSFIASSDATIFYGVFFIERYHRFYVAGRIR
FKKNMLRYKSQSTYCYRNANESQITCFLQVKMNAKSIPQSIIDSSLMSMMQSYLLALRKA
KDIAWRPLEKPIGRIRFDMNCSFYLQTASPTLHIMHQFIEQNPVDERTSKARCDVLEMIS
CYQENSTEEKTKKMLKKSVDNNRQLVIDMQLILQNSYNLTNLYHTNFAMLSPDPFNSNDQ
LVKCESPCPKNTSQTEIRVERVSHQWTVKNFTHCYQEYLEYFVRLPRPDESLTWSIKIYP
KGNGENNKEFIFLCLNRVVPLQSKLSKIGFKSRFIMRNAERKEIEMRVHPSPSHSDYVSY
IKRDVLYPQILPHDIIIVTVEIDVAVEIVTTSNEDNFSYTDSIKHFINDSEAMLKSHTFS
DFEIEVGGRIIPAHRCMLAARSTVFAAMLTHQTHETQMGRLVIPDFDFEVISELVRFIYT
GRCRRLKELSHDLLVVADKYRVLDLKIRCERVLANSLTVENACDLLVIADTHSASYLKEK
ALDFMHQNVSQITTTQGWTLLLNQRQELVTEVVQSFGKVSKRKSNFASENQKEKRKEIHH
RNRDRNLKMSDEEIDNILANFKDVKENMMELWKEEIASARMQKLKLSQPYRPQSYKLVEL
PENLLAQVKSGQKLYIRGKPSDKAYISASNETYELVERNHAGSSTFLICENLQVPTCKQN
DEQQPQDSTICTMISSILTTNYCYVPCGKMIRHLLNDDIYDGLGKSTSKQQWTVDKLLLA
IPSNEQQLCDALKQLHVCEIDGFLRLLSVNYLINLTDRIVREIRANNLNTISVEEAAADL
EELGLISVIESWFKWFTVANDDGQGWHLNEKEISRLYAEGLLSTVESMELKQFLDAWKES
VPVEIETQPSYLYGIALIRDNTSPEVIEYFPSEVFASFAAVVGNFKQSTCTIISIAVWNV
DDI
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtctccggagaaagtatatgatatgattcatccaacgtcagaatatcgtttc
atgtgggatgcgcatgtggataaatggtttagttttattgcatcaagtgatgcgaccatc
ttttatggggtgtttttcatcgagagataccatcgattttatgttgcaggaagaatcaga
ttcaaaaagaatatgcttagatataaaagtcaaagcacttattgttatagaaatgcaaac
gaatctcagatcacatgctttttacaagtgaaaatgaacgctaaatctataccacagagc
ataattgacagttctttaatgagcatgatgcagagttaccttctcgcgttgcgcaaagca
aaggatattgcatggagaccacttgaaaagcctattggacgaattcgttttgacatgaat
tgttccttttatctccaaacagcatcaccaacattacacatcatgcatcagttcatagaa
cagaatcctgttgatgagcgaacatccaaagcaagatgtgatgttcttgaaatgatatct
tgttatcaggaaaactctacagaagagaaaacaaagaagatgttaaagaaatcagttgac
aataacaggcaattagtaatagacatgcaattaatactgcaaaattcttacaatctgaca
aatttataccatactaattttgcaatgctgtcgcctgatccattcaattctaacgatcaa
ttggtgaaatgcgaaagcccctgcccgaaaaacacttcacagacggaaatccgtgttgag
cgagtttctcatcagtggacggtgaaaaattttactcactgctatcaagaatatctagaa
tattttgtccgtttgccacgtcctgatgaaagcttaacgtggtcgatcaaaatatatccg
aaaggaaatggagaaaataataaggaatttatttttctgtgtctcaatcgtgtcgtacca
ttgcagtccaagttgagcaaaattggatttaaaagtcgttttatcatgcgtaacgctgaa
cgcaaggaaattgaaatgcgcgtacatccaagtccaagtcactcagattatgtctcatat
attaaacgtgatgttctttatcctcaaattttgccccacgatataattattgttactgtt
gaaatcgacgtcgcagttgaaattgtgacaactagcaatgaagataatttttcgtataca
gattccatcaaacattttattaacgacagtgaggcgatgttgaagagtcacacattttcg
gattttgaaattgaagtcggcggtcggataattcctgcacatcgttgcatgttggccgct
aggagtacagtgtttgcagctatgttaactcatcagactcatgaaacacaaatgggtcgg
ctcgttataccggattttgattttgaagtgatatcagaattggtgcgttttatttatact
ggccgatgtcgtcgtttgaaagagctgagtcatgatttgctggtagttgccgacaaatat
cgggttttggatttgaaaatacgttgcgaacgggtattggctaattcgttgactgttgaa
aatgcttgcgatttgcttgtcattgcggacacccattcggcaagttatttgaaagaaaaa
gcgctggatttcatgcatcagaatgtcagccagataacaactacccaaggttggacgttg
ttgttgaatcaacgtcaagaattggtcaccgaagttgtgcaaagttttggaaaagtatcg
aagagaaaatctaattttgcaagtgaaaaccagaaagaaaaaaggaaagaaattcaccat
cggaacagggatagaaatttgaaaatgagtgacgaagaaattgacaatattttggcaaat
tttaaggatgttaaagagaatatgatggaattgtggaaagaagaaattgcttcggcgaga
atgcaaaaattgaaattatcccaaccttaccggccgcaatcgtacaagcttgttgaactt
ccggaaaatctactcgctcaagtgaaatcgggtcaaaaattgtacattcgaggtaaacct
tccgacaaggcttacatttccgcgtcgaacgaaacgtacgaacttgtcgaacggaatcac
gcgggctcttcgacatttttaatttgtgaaaatcttcaagttccaacttgcaagcaaaat
gatgaacaacaaccgcaagattcaacaatttgtacaatgatttcgagtatattaactaca
aattattgttacgttccgtgcggcaaaatgatcagacatcttcttaatgatgacatttac
gacggtttgggcaaatcgacttcgaaacagcagtggaccgtggacaaattgttgttggca
attccatcgaatgagcaacaactgtgcgacgctttgaagcaattgcatgtgtgcgaaatt
gacggttttttgcgacttttgagtgtcaattatttgatcaatcttaccgacagaattgta
cgtgaaattcgggcgaacaacttgaatacgattagcgttgaagaagcggccgcagatttg
gaagaattgggcttgatttcggttattgaaagttggttcaaatggttcaccgtggcaaat
gacgatggtcagggttggcatctgaatgaaaaagaaatttctcgtctgtacgcagaaggt
ttgctttctaccgttgaaagtatggaattgaaacaatttttggatgcgtggaaagagagt
gttcctgttgaaattgagacacaacccagttatctttatggtattgcactaatcagagac
aacacttcaccagaagtgatcgaatatttcccttctgaagttttcgcatcgtttgctgct
gtcgtcggaaactttaaacaatcaacgtgtacaattatcagtattgcagtgtggaatgtt
gatgatatttaa
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integrated database retrieval system
