Trichinella spiralis: Tsp_10488 Help Entry Tsp_10488         CDS       T01609                                  Name (RefSeq) WD domain, G-beta protein   KO K15542   polyadenylation factor subunit 2 Organism tsp  Trichinella spiralis Pathway tsp03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     Tsp_10488  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tsp03019]     Tsp_10488 Messenger RNA biogenesis [BR:tsp03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage and polyadenylation specificity factor (CPSF) complex      Tsp_10488 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin DSE1_N Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th ASA1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C CFAP251_N Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SPT8 PAC11 Beta-prop_SCAP PEP5_VPS11_N NBCH_WD40 Tricorn_2nd Ge1_WD40 Beta-prop_WDR11_2nd Beta-prop_DCAF12 WDR54 Beta-prop_NUP159_NUP214 Motif Other DBs NCBI-GeneID:  10902550 NCBI-ProteinID:  XP_003372933 LinkDB All DBs Position Unknown AA seq 1187 aa AA seqDB search MTVWPACAVRPVMDDWSSDNILGETFDQLDDDAAQSGEESPEVPNADTAIQPKVPIVHTF PPVHPFATRPAYSYRFKPQVTVNLAEVEGCGRKLRRNLAQVRRHIDSTAPILNHIETRTW LNRNLRNRIFVQPHFVYSAETYPAMCFPDKPVDCVTTRFVRSAMNKVKCPIFDLCVIMHL MYESLRWTPEGRRLITGASSGEFTLWNGTAFNFETILQAHDSAVRSMRWSHNDMWMITAD NDGFVKYWQANMNNVAMFQAHKECVRDISFSPNDLKFATASDDGTVRVWDFISINEERVL RGHGSDVRAVDWHPQKGLLVSGSRDSQQPVKLWDPRNGQCISTLHCHKNAVLCTQWNQNG NWLLTGSRDHLIKMIDIRMMKELMTFKSHRKEVSAIAWHPFHEGLFVSGGTDGSMIFWHV NYEKELASMENAHDQAIWAVKWHPLGHILASGSNDNNTYVDDRKFWTRNKIGDTIEDFYC VPQSMHEQTTSENNKETNDDAETATEKQKKELNEIHGIQIPGMGLEADILEKIREKAERE APALPALGGIAAGMDANAASVKRTLLKKPPPKKAQRQFERVWNVSTSDGTNLMDYALSSA SRVPKPSLLGRPPDHLVVQYPMDPMPAYEIDPLDSAIYVTASQDYYSENWSIDGSGLPPI GFQHSSSALHGHLSFDTFDDHQQLVELVDPNTSSYVVDEEHVDGVYGIPYSEEYNVEQSF HNDDYTNPTQYTSDHYSHMHSGSSYSHAYGAEFEKGFDDHYIDQYNREHHYQDQYDDQQY ASGQFVDRYTDDQYLDEYGVEQYSAEQQYPEQYERRNKITSPKHSYSQSSVRYKDRSERH YHDSASSYFPNQRNDYSYSAQGTGTSGRSSSEMYKPLLSSGFHDKHQQSRTYMQESHSTA ASPLLQTDPRMKTTRTRDGSLLPTPTDQAPLAYHSTLDRQEEALLESSSVPRDPRLSRQD RWSASGGSSLQDPRLTKKRNLPHSRAGYESYERISRSVTEIDRRDTSAGRSGSTRSRGKS GLSQQMRSDKNHQFSYMSKQRMSSPPVDSGGLLPNPGHSWSHSTTQDPRLRDVMYSRDPR ITSRTTLYSSSDEPEALMNRSGGMPLNAKRSWNAGVSGSDAHLEKRRYPSEQSLISGRYR NETTDPRLKNRPKESVYHSNSQRDFDRSSYDKYGSEYRSSRRYDDIK NT seq 3564 nt NT seq  +upstreamnt  +downstreamnt atgacagtttggcctgcttgcgcagttcgtccagttatggacgattggtcttcagataat attttaggtgaaacatttgaccaactggacgatgacgctgcacaatcgggagaggagtct cctgaagtgccgaatgcagacacggcaattcagccaaaagttcccatcgttcatacgttt ccaccggtgcacccttttgcaactagacccgcttacagctatcgattcaaacctcaagtt actgtcaatttggctgaagtggaaggatgtggaaggaaacttcggaggaatttggcacaa gtacgccgacatattgactctaccgctccaatattaaatcatattgagactaggacgtgg cttaataggaatttacgtaatagaattttcgttcaacctcattttgtatattccgccgaa acatatcctgccatgtgttttcctgacaagcctgtcgattgcgtcactacaagattcgtt cgttcggcaatgaacaaagtgaaatgtccaatttttgacttatgtgtaatcatgcacctt atgtacgaatctctacgttggacaccagagggcagacgactaattactggtgcttcgagt ggcgagtttacactgtggaatgggacagcttttaactttgaaactattcttcaagcacac gattcagctgtacgttcaatgcgctggtcgcataatgatatgtggatgattactgcagat aatgatggttttgttaaatactggcaagcgaacatgaataatgttgccatgtttcaagcg cacaaagaatgtgtgcgtgacataagcttcagtccgaacgatttgaaatttgcgacggca agcgacgatggtactgtaagggtttgggattttattagcattaacgaagagagggtttta cgtggacatggttctgatgtgcgggcagtggactggcatcctcagaagggtttgcttgta tcaggaagccgggactctcaacagcctgtgaaactttgggatcctaggaatggacagtgt atttcaactctgcattgccataaaaatgctgttctgtgtactcagtggaaccaaaatggc aactggctgttgacaggatcgcgagatcatttgattaaaatgatcgacattcgaatgatg aaagaattgatgacgttcaagagtcatcgtaaagaagtttccgcaattgcctggcatcct tttcacgaagggttgtttgttagtggcggtactgatgggtcgatgattttttggcatgtt aattatgaaaaagaattggcttctatggaaaatgcacatgatcaagcgatttgggcagta aaatggcatccgttgggtcacattttagccagcggttccaacgacaataacacgtatgtt gatgaccgaaaattttggacgcgcaacaagattggcgatacaattgaagatttttactgc gtgccgcagtctatgcacgagcagacaacttcggaaaataacaaggagacgaacgatgat gcagaaacggcaactgaaaagcagaaaaaagagttgaacgaaatacatggtattcaaatt cctggcatgggtctggaggcggatatattggaaaagattcgcgagaaagcggaacgagaa gctccagcattgcccgcgttaggtggaattgcggccggtatggatgcgaacgcagcttct gtgaaaagaactttattgaagaagcctccgccgaagaaggcgcaacgtcaatttgaacgt gtgtggaacgttagcactagcgatggtacaaatttgatggactatgcattgtcatccgcg tcacgcgtaccaaaaccgtctctgcttggccgtcctcctgaccacctagtggttcagtat ccgatggacccgatgccagcgtacgaaattgaccctctagattcggcaatttatgttacg gcgtctcaagattattattctgaaaactggtctatagatggaagtggactgccccctata ggatttcaacattcgtcctcggcgctgcacgggcatctcagcttcgatacttttgacgat catcagcagctggttgaactggtggatccgaacacttcatcttatgttgttgatgaagaa cacgtggacggagtttatggaattccctattctgaagaatacaatgtcgagcagagtttt cacaacgacgactacacgaatccgacacagtatacgtctgatcattattcacacatgcac agcggaagcagttattcacatgcttacggtgctgaatttgagaaaggtttcgatgaccac tatattgaccagtataatcgagagcatcattatcaagaccagtatgacgatcagcagtat gcttctggccaatttgtggatcgatacactgatgatcagtacttagatgaatatggtgtt gaacaatacagtgcagaacagcagtaccctgagcagtatgaacgtaggaataaaataaca tctccaaagcactcatattctcagtcatcagtgcggtacaaagaccgatccgaacgacat tatcatgatagtgcgagttcttattttcccaatcagcgtaacgattattcttattctgcc caagggacagggacaagtggccgatcatcttctgaaatgtacaaaccgttgctttctagt ggatttcacgataagcaccaacaatctcgcacgtatatgcaggaatcacattcgactgca gcttcgccgctcttgcaaacagatccgaggatgaaaacaacacgaacgcgagacggttca ctgttgccgacaccaacagatcaggcccccttggcatatcactcgactttggacagacaa gaggaagctttgctagaatcgagctcagtgcctcgggatcctagactatctcggcaggac cgttggtcagcatctggtggtagtagtttgcaggatccaagactgacgaagaagcggaat ttgccgcatagtcgagctggttacgaatcgtacgaaagaatttcacggtcagtgacggaa atcgaccgtcgtgacaccagtgccgggcgttcaggttcaacacgaagtcgcgggaagtcg ggtctgtctcagcagatgagaagcgacaaaaatcaccagttcagttacatgtccaagcag cgcatgtcatctccaccggtcgattcaggaggcttgctgccgaatcctggtcattcgtgg tcacactcgacaacccaagatcctagactaagagatgttatgtacagtcgagatccgcga atcactagtcgaacgacgctgtattcgagtagcgatgagccagaggctttgatgaaccgc agtggggggatgcctttgaacgcgaaacgatcgtggaatgcgggcgtatcaggttctgat gcgcatttggaaaagcgacgctacccaagcgaacagtcgctgatttccggtcgatacaga aatgaaacgactgacccaagactaaagaacagacccaaagagtcagtctatcattcgaac agtcagagagatttcgaccgcagcagttacgataaatatggatctgaatatcgcagtagt cgccgatacgacgacattaaataa

DBGET integrated database retrieval system