Trichinella spiralis: Tsp_10539
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Entry
Tsp_10539 CDS
T01609
Name
(RefSeq) syntaxin-12
KO
K13813
syntaxin 12/13
Organism
tsp
Trichinella spiralis
Pathway
tsp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Tsp_10539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_10539
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_10539
Membrane trafficking [BR:
tsp04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
Tsp_10539
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tsp_10539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Imm68
TACC_C
Cytochrom_B562
REC114-like
Motif
Other DBs
NCBI-GeneID:
10900779
NCBI-ProteinID:
XP_003372281
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MEERGIDRSWNYQTGNTHPMNEGRILTVFPMATIQRMVAQLGTTQDSEHLRQNLHEIQHF
THTLSQTTMESLKNLSSLPSPSNASEQRQWKLQRERLTNDFSVVLNNFQAVQRSAAQKEK
VSVLRARVDSGIGGVSFSSVIPQEKLQIEQNLDIQTIQEREQVIRQLESDIMDVNQIFKD
LALMVHQQGEVIDSIEANVDNAQVHIDQGSTQIQRAAQYQESKNKAL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgtggaatcgatagatcatggaattatcaaactggtaatactcatccgatg
aacgagggaaggattttaaccgtctttcccatggcaacaattcaacgtatggttgcacag
ttgggaacaacacaagattcggaacatttgcgacagaatttgcacgaaattcaacatttc
acgcatacgctctcgcaaactactatggaatcgttgaaaaatctttccagcttgccgtcg
ccttcgaatgcatcagaacaacgtcaatggaaattgcagcgagaacgtttgacaaatgat
ttttcggtagttctgaacaactttcaagctgttcaacgttcggctgcccaaaaggagaaa
gtcagcgtgctgcgagctagagttgattctggcatcggcggagtgagcttttcttctgtg
ataccacaagagaaattacaaattgaacagaatttggatatccaaactatacaagaacgt
gaacaggtgattcgtcaacttgagtccgatattatggatgtgaatcaaattttcaaagat
ctagcattgatggtccatcagcagggtgaagtaattgatagtattgaagcgaacgtggat
aatgctcaggtgcatatagatcaaggttctactcaaattcaaagagctgcacaatatcag
gaaagtaagaataaagctttgtga
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