Trichinella spiralis: Tsp_10588
Help
Entry
Tsp_10588 CDS
T01609
Name
(RefSeq) mucolipin-1
KO
K08518
syntaxin-binding protein 5
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_10588
Membrane trafficking [BR:
tsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
Tsp_10588
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
Tsp_10588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
Beta-prop_HPS5
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Lgl_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
10900832
NCBI-ProteinID:
XP_003372334
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MQPAVGTDNCHYGFACCPAPVSVRRSARRVMDKAGRKIRAAFEGLQNLWNNNQQIDLQSV
ETLTPEDFAVSEITCHGFPYQPTCLAYDPVQKLIAIGTQCGAIRILGQPGVNVSIRHPNK
SSVIQLQFVFNEGAVISLCSDCCIHMWNIRLKRPEIVHSLRFTREKLTLMYLPFQSSWLY
LGTEKGNVHVVSIETFTLSGYVIHWNKAIDMCARHMIQKMYANVFSTNPHHLHNVQCVVD
LSQKHHPGTVVHLSECPSDDSKEIVFFVCLFVCFHFSTTTLSFDRRNFFHHCPTNILYEH
CSIVDFHSEWGNAAHWLRMRYAGIVGLERQVGRFEISMHAGMSRLRSACWHCEGKQFMCA
LSNGSLMTWTMKKTAEPTDLVIPLSKLDCKSFNSAGAGNSKQAETETAGSQQRVQAASSK
QLFYRPIDKVDWCTQRNSEDLVLFSGGTPFLNSERPPCITIMRGKSVSVLEMEHPVITFI
TLWDTPYITEEQDCSAVAVLLQNDLVAIDLKSEGCLCFENPYSMNIHDSPVTCCTYLSDC
PIDLIRALYAIGSKQKKRGYTSKNWPLTGGVWSSSPSSDPELVITGHSDGSVKFWDFSSV
SLQILYRLRTAKFFEIDESCVRTDLNLFSITHILLCAASRYLAVSGMAGHIVLFKFNRQE
SSAEVPILQIQAFGSPLYHHVSPDKSPANPSNSAKTPPCCTNASANFSSLDSDSCSSLAK
PVSYYPVKMKSGPTKRACGYQTDVICLNAWPSLSLPEAISAMALNSAYGLFAYGTDQGLV
VVDILQKCCITVLETAELYGTGDATSLRSPKSGGSAALNEKIASFDISDSRQSSEKQDSA
TAFTRSNTASSENVQHSSNKAYVKMSSKSMSLAGGKPPKPSPRERTKCSSDRESLDSPDM
GFEEGVCYLEFIENSSRIEQLNGVNLWVGTTYGTVIPVNIKLPEQEQRLDSPVQVTIAGI
TLTKQCGFILSIGFLDSQCNMLLPPVKFFKELDQENSLAKNRVLRRANTLVTSVDVEGLQ
STKSDTLDFSSSSSSCGTEKKEYNVAEQYIVICAERSSRVLSLSNLSTTLFSFKYDFPFV
QASVVTFNAKPIIAGCFSNGRIGAYSIPSLRPLIDVPFFPPNLHCLETVKFGHQGTGVYM
CSPTELLKFAISAHFVQDSKDALGSLYLPCVMPQPPKTNFFKELFNISSLGESCGKPLKN
VAQRIPMQTLSAEVSQKKVNTTNEVAKARLALHERGEKLSEVEDRTAALLDSTKSYADHM
HEIMLKQKNKKWYQL
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccagcagtcggtacagataattgtcattatggttttgcatgctgccctgcgccg
gtgagtgtccggcgaagcgcgaggcgagtgatggacaaggcgggccggaagatccgggcc
gccttcgaaggcttgcaaaatttgtggaacaacaatcagcaaatcgatctacagtcggtc
gaaacgctaactccagaggattttgccgtttctgaaatcacatgtcatggatttccatac
cagccgacttgcttggcttatgatcccgttcaaaagttgatcgccattggaactcagtgt
ggtgcaataagaatacttggacaaccgggagttaatgtcagcattagacatcccaacaaa
tcgtcagtaattcagttgcagtttgttttcaacgagggtgccgtgatctcactttgcagc
gactgttgtattcacatgtggaacattcgactgaagagacccgaaattgtgcacagtctt
cgatttaccagagaaaaattaactctgatgtatttgccatttcaaagcagctggttgtat
cttggaacggaaaagggcaatgttcacgtggtcagcattgaaacgttcacactttccggc
tacgtgatccactggaacaaagcaatcgacatgtgcgcacgtcatatgattcagaaaatg
tatgcaaatgtattttcaacaaacccacatcatttgcataatgttcagtgcgtagtggat
ttgtcacaaaagcatcatcctggaacagtggtccatttgagcgaatgtccgtctgacgac
agcaaggaaattgtattttttgtttgtttgtttgtttgttttcactttagcacgacaacg
ctttcttttgatcgtcgtaatttttttcatcactgtccaacaaatatcctctatgagcat
tgttcaattgttgattttcacagtgaatggggaaatgctgctcattggctacgaatgcgg
tacgctggtattgtgggacttgaaagacaagtcggtcgattcgagatatcaatgcatgca
ggtatgtcgaggcttcgttcggcttgttggcactgcgaaggcaagcagttcatgtgcgcg
ttgtcgaacggttcgctgatgacttggaccatgaagaagaccgccgaaccgaccgacctg
gtcattccattgtccaaattggactgcaagtcgttcaacagtgccggtgccggcaacagc
aaacaagccgaaactgaaactgccggctcacaacagcgcgtccaagccgcttcttccaag
cagttgttctacagaccgattgacaaagtcgactggtgcacgcagcgcaacagcgaagat
ttggtcctgttctcgggcggcacgccatttttgaattccgaacgaccaccctgcatcaca
ataatgcgcggcaaatcggtatccgtgcttgaaatggaacatccggtaataacgttcatc
acactctgggacacgccctacatcactgaagaacaagactgttccgccgtggcggttctg
ttgcagaatgatctagtcgctattgacctcaagagtgaaggttgtttgtgctttgaaaat
ccatattcgatgaatatacacgattctcctgtcacttgttgcacatatttgtccgactgt
ccaattgatcttattcgagcgttgtacgcgatcggttcgaagcaaaaaaagcgcggctac
acgtccaaaaactggccactgaccggcggagtgtggagttcaagtccatcgagtgatcca
gaattggtcataactggccattccgacggatcggtgaaattttgggacttttcttcggtc
agcttgcagatattgtacaggttgaggacggcgaaatttttcgaaatcgacgaaagttgc
gtgcgcaccgatttgaatctattttccatcacgcatattttactttgtgccgcttcgagg
tatctcgccgtcagtggcatggccggtcatattgtgttgttcaaattcaatcgtcaagaa
tcttcggcagaagttccgattttgcaaatccaagcattcggcagtccgctctatcatcac
gtctcacctgacaagagtccggctaatccatcgaattctgcgaaaactccgccttgttgc
acaaacgcgtcggctaatttttcatcgctcgattctgattcatgctcatctttagcgaag
ccggtatcttattatccagtgaaaatgaaatctggaccgacaaagcgtgcctgcggctat
caaactgacgtgatttgtttgaacgcttggccaagtctcagcttgcccgaagctatttct
gccatggcactgaacagtgcttacggactatttgcctatgggactgatcaaggtttggta
gttgtcgacattttgcaaaagtgttgcatcacggtattggaaacggcagaattgtacgga
actggcgatgcaacaagcttgcgaagtccgaaaagtggtggcagtgcagcattgaatgag
aaaattgcttcgtttgatatttcggacagtcgtcaatcttcagaaaagcaggatagcgcg
actgcttttacacgttctaatactgcttcatctgagaatgtgcaacacagcagcaacaaa
gcttacgtgaaaatgtcaagcaagagcatgtctctagcaggaggaaagcctcctaaaccg
tctcctcgagaacgtaccaaatgcagcagtgatcgtgaaagtttggacagtcctgatatg
ggatttgaagaaggtgtatgctatttggaatttatcgaaaactcatccagaatagaacaa
ttgaacggtgttaatttatgggtaggcaccacgtacggtactgtgattccggtgaacatc
aaattaccagaacaagagcaacggctcgactctcctgtgcaggttacaattgcaggaata
acactgacaaagcagtgtggatttattttgagcattggttttttggattctcagtgcaac
atgttgctgccgccggtaaaattttttaaagagttggaccaagaaaattctcttgccaaa
aatagagtgcttcgccgagccaacactttggtaactagcgtcgatgtggaagggttgcag
tccaccaaaagtgacactttggatttttcatcttcatcttcttcctgcggaacggaaaaa
aaagaatataacgttgcagagcagtacattgtaatttgtgcggaacgttcgtccagagtg
ttgtccttgtccaacttgagcacgacgttgttcagctttaaatacgatttcccgtttgtc
caagccagtgtggtcactttcaatgccaaaccgattattgctggctgcttcagcaacggc
cgtattggcgcctacagcataccctcgttgcgaccgcttattgacgtgccattttttcct
ccaaatttgcactgtctcgaaacggtgaaatttggacaccaaggtactggtgtatacatg
tgcagtccaacggaattgttgaaatttgccatctctgcccactttgtgcaggatagcaaa
gacgctctgggcagcttgtatttgccgtgtgtgatgccccagccgccgaagacgaatttt
ttcaaagaacttttcaacatcagcagtcttggagaaagttgcggcaagccgttgaagaac
gttgcccaacgcataccaatgcagacattgtctgctgaagtttctcagaaaaaggtgaac
acgacaaacgaagttgccaaagccaggctggcattgcatgagcgaggcgaaaaattgtcc
gaggtcgaagatcgaaccgcagctttgttggattcgacgaaaagttatgctgatcacatg
cacgagattatgcttaaacagaagaacaaaaaatggtatcaactttga
DBGET
integrated database retrieval system
